RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 FGGYQ96C11 551 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 A0A1W2PPK0 400 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 A6NIN4 97 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 DHRS7CA6NNS2 312 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 SC5DO75845 299 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 GATBO75879 557 aaKnown RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 CD2P06729 351 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 FAHP16930 419 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 GALP22466 123 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 HILS1P60008 231 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 UNQ9370/PRO34162Q6UXP9 181 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 ANKRD13BQ86YJ7 626 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 ZFAND2BQ8WV99 257 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 RPL3LQ92901 407 aaKnown RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 ITFG2Q969R8 447 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 ADAT3Q96EY9 351 aaPredicted RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 NAA50Q9GZZ1 169 aaKnown RBP12.65□□□□□ -0.38
RAB40B-203ENST00000570676 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 MMP26Q9NRE1 261 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 ENPP5Q9UJA9 477 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.38
RAB40B-203ENST00000570676 TRBV5-7A0A0A0MS05 114 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 IGHV3-64DA0A0J9YX35 117 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 TRAPPC2LH3BP13 241 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 IFNL4K9M1U5 179 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 CYB5R3P00387 301 aaPredicted RBP12.64□□□□□ -0.39
RAB40B-203ENST00000570676 GNALP38405 381 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 DDOSTP39656 456 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 GATA4P43694 442 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 SRP9P49458 86 aaKnown RBP12.64□□□□□ -0.39
RAB40B-203ENST00000570676 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF181Q2M3W8 571 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 FAM27D1Q5T7N8 215 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 USP43Q70EL4 1123 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 MOGAT3Q86VF5 341 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 MUC20Q8N307 709 aaPredicted RBP12.64□□□□□ -0.39
RAB40B-203ENST00000570676 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF418Q8TF45 676 aaPredicted RBP12.64□□□□□ -0.39
RAB40B-203ENST00000570676 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
RAB40B-203ENST00000570676 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 PIN1P1O15428 100 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 NOL3O60936 208 aaKnown RBP12.63□□□□□ -0.39
RAB40B-203ENST00000570676 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 GABARAPO95166 117 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 UCHL1P09936 223 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 FGF9P31371 208 aaPredicted RBP12.63□□□□□ -0.39
RAB40B-203ENST00000570676 PMELP40967 661 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 CD200P41217 278 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 LSM3P62310 102 aaKnown RBP12.63□□□□□ -0.39
RAB40B-203ENST00000570676 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 HSD17B12Q53GQ0 312 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 GDPGP1Q6ZNW5 385 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 FTMTQ8N4E7 242 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 NANPQ8TBE9 248 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 SLC6A7Q99884 636 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 CENPOQ9BU64 300 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
RAB40B-203ENST00000570676 TMEM165Q9HC07 324 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 TMEM100Q9NV29 134 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 DOCK11Q5JSL3 2073 aa12.63□□□□□ -0.39
RAB40B-203ENST00000570676 SMIM31A0A1B0GVY4 71 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF205O95201 554 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 FSTL3O95633 263 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
RAB40B-203ENST00000570676 TMBIM6P55061 237 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 PAX2Q02962 417 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF154Q13106 437 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 FAM201AQ5SY85 155 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 CLVS2Q5SYC1 327 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 CELF2-AS1Q8N7Q2 184 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 Q8TCH9 128 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 RAB2BQ8WUD1 216 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 PP6455Q8WZ26 134 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 PIGCQ92535 297 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 DVL3Q92997 716 aaPredicted RBP12.62□□□□□ -0.39
RAB40B-203ENST00000570676 DACT3Q96B18 629 aaPredicted RBP12.62□□□□□ -0.39
RAB40B-203ENST00000570676 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms