RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ERI1Q8IV48 349 aaKnown RBP6.05□□□□□ -1.44
CNOT1-222ENST00000570139 OR6V1Q8N148 313 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 MS4A15Q8N5U1 240 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF485Q8NCK3 441 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 HSD17B8Q92506 261 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 TMIGD2Q96BF3 282 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 OPALINQ96PE5 141 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 OR2M2Q96R28 347 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 EXO5Q9H790 373 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 BABAM2Q9NXR7 383 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 NCKAP5O14513 1909 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 RIF1Q5UIP0 2472 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 A0A0U1RRA0 63 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 A0A1W2PQL4 384 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF716A6NP11 495 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF587BE7ETH6 402 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 H3BMQ9 156 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 H7C1C5 153 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SYT7O43581 403 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 AIREO43918 545 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 CXCL13O43927 109 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GPRIN2O60269 458 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF254O75437 659 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 HLA-DPB1P04440 258 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 MRPL3P09001 348 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 CTLA4P16410 223 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 LAP3P28838 519 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 UGT2B10P36537 528 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TGFBR2P37173 567 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 NAA10P41227 235 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SERPINB10P48595 397 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TGM4P49221 684 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 LSM6P62312 80 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 LCN6P62502 163 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SRSF4Q08170 494 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GAGE5Q13069 117 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GAGE6Q13070 117 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TWIST1Q15672 202 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 PCK2Q16822 640 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 OR2A2Q6IF42 318 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 FAM159AQ6UWV7 190 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 PAMR1Q6UXH9 720 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 FOXL2NBQ6ZUU3 175 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 USP43Q70EL4 1123 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ABHD12BQ7Z5M8 362 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 LHFPL3Q86UP9 236 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 PHC2Q8IXK0 858 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 C20orf196Q8IYI0 205 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 UBQLNLQ8IYU4 475 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM123Q8N131 208 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 KLHDC1Q8N7A1 406 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SLC26A10Q8NG04 563 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 OR6N2Q8NGY6 317 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 OTOSQ8NHW6 89 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ZPLD1Q8TCW7 415 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 PHYHIPQ92561 330 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM54Q969K7 222 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 C12orf43Q96C57 262 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 C4orf36Q96KX1 117 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GPR137Q96N19 417 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 OR5M11Q96RB7 305 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF649Q9BS31 505 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 MROQ9BYG7 248 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SRXN1Q9BYN0 137 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 LINC00470Q9BZP3 86 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 CSTL1Q9H114 145 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 C5orf66Q9H5L9 145 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 NIPAL2Q9H841 368 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 MED29Q9NX70 200 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GLTPQ9NZD2 209 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 CLEC2DQ9UHP7 191 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 SSR3Q9UNL2 185 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 GSTK1Q9Y2Q3 226 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 FLVCR1Q9Y5Y0 555 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 PCNX3Q9H6A9 2034 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 TNRC6AQ8NDV7 1962 aaKnown RBP6.04□□□□□ -1.44
CNOT1-222ENST00000570139 AHCTF1Q8WYP5 2266 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 CEP250Q9BV73 2442 aa6.04□□□□□ -1.44
CNOT1-222ENST00000570139 KNTC1P50748 2209 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 METTL15A6NJ78 407 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 DCTN6O00399 190 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF432O94892 652 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 APOC1P02654 83 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 OPN1LWP04000 364 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 HOXD4P09016 255 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-222ENST00000570139 SFTPCP11686 197 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 ALOX5APP20292 161 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 FGF9P31371 208 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-222ENST00000570139 PYCR1P32322 319 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 DUTP33316 252 aaKnown RBP6.03□□□□□ -1.44
CNOT1-222ENST00000570139 RFC3P40938 356 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF85Q03923 595 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM41BQ5BJD5 291 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 SLC25A47Q6Q0C1 308 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 CD200R1LQ6Q8B3 271 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 AAED1Q7RTV5 226 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
CNOT1-222ENST00000570139 GPR137CQ8N3F9 429 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms