RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TRIM77I1YAP6 450 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 GPR37O15354 613 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 WBP4O75554 376 aaKnown RBP10.76□□□□□ -0.69
CNOT1-220ENST00000569916 TOX4O94842 621 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 HTR1AP08908 422 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ACAA1P09110 424 aaPredicted RBP10.76□□□□□ -0.69
CNOT1-220ENST00000569916 PGA5P0DJD9 388 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 PEX2P28328 305 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 IL13RA1P78552 427 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 RAB40BQ12829 278 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 GALEQ14376 348 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 LRRC36Q1X8D7 754 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 LRRC10Q5BKY1 277 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ACP7Q6ZNF0 438 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 CALHM1Q8IU99 346 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 LY6G5BQ8NDX9 201 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF555Q8NEP9 628 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 TRMT10AQ8TBZ6 339 aaKnown RBP10.76□□□□□ -0.69
CNOT1-220ENST00000569916 FAM216AQ8WUB2 273 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 C10orf35Q96D05 121 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 MED30Q96HR3 178 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 C1orf147Q96MC9 270 aaPredicted RBP10.76□□□□□ -0.69
CNOT1-220ENST00000569916 DCTN5Q9BTE1 182 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ADI1Q9BV57 179 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ALG8Q9BVK2 526 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 MRPS18AQ9NVS2 196 aaKnown RBP10.76□□□□□ -0.69
CNOT1-220ENST00000569916 RASL12Q9NYN1 266 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 POLDIP2Q9Y2S7 368 aa10.76□□□□□ -0.69
CNOT1-220ENST00000569916 ANK2Q01484 3957 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 IGKV1-27A0A075B6S5 117 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 FAM230AA0A1W2PPH8 454 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 DNAJC9-AS1A6NH13 148 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 J3QLW9 94 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 NOS1APO75052 506 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 GATBO75879 557 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 CLIC3O95833 236 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 FADS2O95864 444 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ISG15P05161 165 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF19P17023 458 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 CCR9P51686 369 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ARF6P62330 175 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 UBA52P62987 128 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SMN1Q16637 294 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 GPR157Q5UAW9 335 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF691Q5VV52 312 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 METTL11BQ5VVY1 283 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 RUSC1-AS1Q66K80 236 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 PACRGLQ8N7B6 248 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 OR52I1Q8NGK6 324 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 OR10AC1Q8NH08 325 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 NPRL2Q8WTW4 380 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ADAT3Q96EY9 351 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SDSLQ96GA7 329 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 NRIP2Q9BQI9 281 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 PKIBQ9C010 78 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 CNTD2Q9H8S5 307 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ISG20L2Q9H9L3 353 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 HES4Q9HCC6 221 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 INPP5EQ9NRR6 644 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 ERVK13-1Q9NX77 482 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SLC25A10Q9UBX3 287 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 SLC7A11Q9UPY5 501 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 RPL36Q9Y3U8 105 aaKnown RBP10.75□□□□□ -0.69
CNOT1-220ENST00000569916 MAB21L2Q9Y586 359 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
CNOT1-220ENST00000569916 CENPVL3A0A0U1RRI6 287 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 OR4C45A6NMZ5 311 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 GABRA2P47869 451 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 CAV3P56539 151 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 ERVK11-1P61568 191 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 IL24Q13007 206 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 ALKBH1Q13686 389 aaKnown RBP10.74□□□□□ -0.69
CNOT1-220ENST00000569916 RBMS3Q6XE24 437 aaKnown RBP10.74□□□□□ -0.69
CNOT1-220ENST00000569916 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 BATF2Q8N1L9 274 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 CD177Q8N6Q3 437 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 KIR3DL3Q8N743 410 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 ZNRF1Q8ND25 227 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 OR51A4Q8NGJ6 313 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 CNIH3Q8TBE1 160 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 PP6455Q8WZ26 134 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 H1FXQ92522 213 aaKnown RBP10.74□□□□□ -0.69
CNOT1-220ENST00000569916 MRPL48Q96GC5 212 aaKnown RBP10.74□□□□□ -0.69
CNOT1-220ENST00000569916 DMRTB1Q96MA1 342 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
CNOT1-220ENST00000569916 ELL3Q9HB65 397 aaPredicted RBP10.74□□□□□ -0.69
CNOT1-220ENST00000569916 IGKV1-9A0A0C4DH69 117 aa10.73□□□□□ -0.69
CNOT1-220ENST00000569916 RFPL4AA6NLU0 287 aa10.73□□□□□ -0.69
CNOT1-220ENST00000569916 RFPL4AL1F8VTS6 287 aa10.73□□□□□ -0.69
CNOT1-220ENST00000569916 CASQ2O14958 399 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms