RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LINC00862A6NCI5 91 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A10PA6NDY2 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A18PA6NE21 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A16PA6NEW6 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TUBAL3A6NHL2 446 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A20PA6NIJ5 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A8PA6NJQ4 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A7PA6NKC0 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM166BA8MTA8 275 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A22PA8MWA6 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A12PA8MX19 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A5PA8MXJ8 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A23PA8MXZ1 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF587BE7ETH6 402 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 F5H5P2 479 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 RAD51DO75771 328 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SLC22A5O76082 557 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CST4P01036 141 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 NRASP01111 189 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 IFNA7P01567 189 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 IGHG3P01860 377 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A15PP0C7V4 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A13PP0C7W8 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A14PP0C7W9 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FAM90A24PP0C7X0 464 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PATE4P0C8F1 98 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM225BP0DP42 221 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 LIPCP11150 499 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SLC25A4P12235 298 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CPT2P23786 658 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 MPGP29372 298 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 BLVRBP30043 206 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CALCRP30988 508 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 HTR5AP47898 357 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ATP1B3P54709 279 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 H2BFSP57053 126 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TAS2R31P59538 309 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TAS2R46P59540 309 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 GMFBP60983 142 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SEC61A1P61619 476 aaKnown RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SNRPD2P62316 118 aaKnown RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF92Q03936 586 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SRYQ05066 204 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PDZK1IP1Q13113 114 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 DHRS2Q13268 280 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SURF2Q15527 256 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 C2orf68Q2NKX9 166 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF766Q5HY98 468 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 RNFT1Q5M7Z0 435 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 LY6G6FQ5SQ64 297 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ELP2Q6IA86 826 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TEX261Q6UWH6 196 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PLXDC2Q6UX71 529 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CHMP1BQ7LBR1 199 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 LYG2Q86SG7 212 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PEG10Q86TG7 708 aaKnown RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM200AQ86VY9 491 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 DMRTC2Q8IXT2 367 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SAXO1Q8IYX7 474 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 GVQW1Q8N7I0 195 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 OR52B4Q8NGK2 314 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FNDC9Q8TBE3 224 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 NUDCD2Q8WVJ2 157 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 BCL2L2Q92843 193 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SNAPC3Q92966 411 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 APH1AQ96BI3 265 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ARHGAP5-AS1Q96IT6 56 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 Q96M66 194 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ALKBH3Q96Q83 286 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 S100A13Q99584 98 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 DHRS9Q9BPW9 319 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PRRG4Q9BZD6 226 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SLC6A15Q9H2J7 730 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 BANF2Q9H503 90 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 OPA3Q9H6K4 179 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CALHM2Q9HA72 323 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 IFT46Q9NQC8 304 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 GPR173Q9NS66 373 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 CA10Q9NS85 328 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 DECR2Q9NUI1 292 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 DLL3Q9NYJ7 618 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 EIF3KQ9UBQ5 218 aaKnown RBP4.66□□□□□ -1.66
SF3B3-213ENST00000569687 OPN4Q9UHM6 478 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 EDARQ9UNE0 448 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 SLC7A11Q9UPY5 501 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 VSIG4Q9Y279 399 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 U3KQ87 197 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 FREM2Q5SZK8 3169 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 MED12Q93074 2177 aa4.65□□□□□ -1.66
SF3B3-213ENST00000569687 DOCK10Q96BY6 2186 aa4.65□□□□□ -1.66
SF3B3-213ENST00000569687 IGKV1-27A0A075B6S5 117 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 TRGV5A0A0B4J1U4 118 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 A0A1W2PP11 408 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 C9orf170A2RU37 121 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 ARGFXA6NJG6 315 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 RFPL4AA6NLU0 287 aa4.65□□□□□ -1.67
SF3B3-213ENST00000569687 DBX1A6NMT0 343 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms