RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 A6NIN4 97 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 METTL15A6NJ78 407 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 M0R1W7 72 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 ENTPD6O75354 484 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 SULT1C4O75897 302 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 RPP14O95059 124 aaKnown RBP6.41□□□□□ -1.38
CDH3-209ENST00000569080 IGHV4-59P01825 116 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 KRT8P05787 483 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 GABRB1P18505 474 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 MDKP21741 143 aaPredicted RBP6.41□□□□□ -1.38
CDH3-209ENST00000569080 KIR3DL2P43630 455 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 HAAOP46952 286 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 ERVK11-1P61568 191 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 SNRPGP62308 76 aaKnown RBP6.41□□□□□ -1.38
CDH3-209ENST00000569080 KLRD1Q13241 179 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 PRR31Q5SQ13 230 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 SLC25A30Q5SVS4 291 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 MOB3CQ70IA8 216 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 THAP5Q7Z6K1 395 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 CALHM1Q8IU99 346 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 PDZD9Q8IXQ8 264 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 OR10H4Q8NGA5 316 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 HIST1H2AAQ96QV6 131 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 CHST5Q9GZS9 411 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 C1RLQ9NZP8 487 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 H2AFY2Q9P0M6 372 aaPredicted RBP6.41□□□□□ -1.38
CDH3-209ENST00000569080 ZNRD1Q9P1U0 126 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 ONECUT1Q9UBC0 465 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 GTF2A1LQ9UNN4 478 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 MMP24Q9Y5R2 645 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 POMT1Q9Y6A1 747 aa6.41□□□□□ -1.38
CDH3-209ENST00000569080 TRBV23-1A0A0A0MS06 115 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 LOC107986453A0A1B0GWG9 222 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 RFPL4AA6NLU0 287 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 RFPL4AL1F8VTS6 287 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 F8VVB4 439 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 F8VWA3 439 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 NDUFA7O95182 113 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 OMGP23515 440 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 IER3P46695 156 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 CEBPDP49716 269 aaPredicted RBP6.4□□□□□ -1.38
CDH3-209ENST00000569080 ALDH3A2P51648 485 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 NANOS3P60323 173 aaKnown RBP6.4□□□□□ -1.38
CDH3-209ENST00000569080 CDC42P60953 191 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 UBE2V2Q15819 145 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 TAF9Q16594 264 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 OCLNQ16625 522 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ODF4Q2M2E3 257 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 SMIM21Q3B7S5 101 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 TP53I3Q53FA7 332 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ZFP1Q6P2D0 407 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 FDX2Q6P4F2 183 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 FIP1L1Q6UN15 594 aaKnown RBP6.4□□□□□ -1.38
CDH3-209ENST00000569080 SHISA2Q6UWI4 295 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 C1orf122Q6ZSJ8 110 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ZNF573Q86YE8 665 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 PNKDQ8N490 385 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 CBR4Q8N4T8 237 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 C11orf42Q8N5U0 333 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 YIPF7Q8N8F6 280 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 SGMS2Q8NHU3 365 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ZNF671Q8TAW3 534 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 SSMEM1Q8WWF3 244 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 TRUB1Q8WWH5 349 aaKnown RBP6.4□□□□□ -1.38
CDH3-209ENST00000569080 WFDC12Q8WWY7 111 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 H1FXQ92522 213 aaKnown RBP6.4□□□□□ -1.38
CDH3-209ENST00000569080 RFKQ969G6 155 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ZDHHC16Q969W1 377 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 TMIGD2Q96BF3 282 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 MED30Q96HR3 178 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 AJUBAQ96IF1 538 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 ZNF649Q9BS31 505 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 PKIBQ9C010 78 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 C19orf12Q9NSK7 152 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 RASL12Q9NYN1 266 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 AASSQ9UDR5 926 aa6.4□□□□□ -1.38
CDH3-209ENST00000569080 IGKV1-9A0A0C4DH69 117 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 MEGF11A6BM72 1044 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 POM121CA8CG34 1229 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 H3BSH0 61 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 NPFFO15130 113 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 SLC16A6O15403 523 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 SYT7O43581 403 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 GPR137BO60478 399 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ZNF737O75373 536 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 UBCP0CG48 685 aaKnown RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 NDUFB7P17568 137 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 SAA4P35542 130 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 GABRA2P47869 451 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 RAG2P55895 527 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 RPL15P61313 204 aaKnown RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 ACTC1P68032 377 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ACTA1P68133 377 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 GUCA2AQ02747 115 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ZNF91Q05481 1191 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 IL24Q13007 206 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ZIK1Q3SY52 487 aaPredicted RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 NCR3LG1Q68D85 454 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 CRIP3Q6Q6R5 217 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 CCDC121Q6ZUS5 278 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms