RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
CLK3-224ENST00000568605 ATP1B3P54709 279 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 GMFBP60983 142 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 LRRC10Q5BKY1 277 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 ARMCX4Q5H9R4 360 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 DMRTC1Q5HYR2 192 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 OR2G6Q5TZ20 316 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 STUMQ69YW2 141 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 FIP1L1Q6UN15 594 aaKnown RBP10.83□□□□□ -0.68
CLK3-224ENST00000568605 LYPD2Q6UXB3 125 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 LHFPL2Q6ZUX7 228 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 RDH10Q8IZV5 341 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 POC1AQ8NBT0 407 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 GGHQ92820 318 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 MYDGFQ969H8 173 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 SMIM19Q96E16 107 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 ANKRD60Q9BZ19 345 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 NLKQ9UBE8 527 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
CLK3-224ENST00000568605 IGHV2-70DA0A0C4DH43 119 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 SLC1A7O00341 560 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 NDUFB3O43676 98 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 RHBDL1O75783 438 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 NXPH2O95156 264 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 PGA5P0DJD9 388 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 MYF6P23409 242 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 AZGP1P25311 298 aaKnown RBP10.82□□□□□ -0.68
CLK3-224ENST00000568605 VHLP40337 213 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 WNT4P56705 351 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 IL13RA1P78552 427 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 IL24Q13007 206 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 UBE2V2Q15819 145 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 C1QL2Q7Z5L3 287 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 Q8IYB0 196 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 PNLDC1Q8NA58 520 aaKnown RBP10.82□□□□□ -0.68
CLK3-224ENST00000568605 NANPQ8TBE9 248 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 GPR148Q8TDV2 347 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 RAB40AQ8WXH6 277 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 ST8SIA4Q92187 359 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 FGGYQ96C11 551 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 ADAT3Q96EY9 351 aaPredicted RBP10.82□□□□□ -0.68
CLK3-224ENST00000568605 MED30Q96HR3 178 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 PDCD1LG2Q9BQ51 273 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 NUDT16L1Q9BRJ7 211 aaKnown RBP10.82□□□□□ -0.68
CLK3-224ENST00000568605 MND1Q9BWT6 205 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 TMPRSS13Q9BYE2 586 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 WDR13Q9H1Z4 485 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 CTSZQ9UBR2 303 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 ERGIC3Q9Y282 383 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 AUP1Q9Y679 476 aa10.82□□□□□ -0.68
CLK3-224ENST00000568605 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 OR2AT4A6NND4 320 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 E9PI62 339 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 TRAPPC2LH3BP13 241 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 LIPFP07098 398 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 HCKP08631 526 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 ATF1P18846 271 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 GTF2A1P52655 376 aaPredicted RBP10.81□□□□□ -0.68
CLK3-224ENST00000568605 HOXA4Q00056 320 aaPredicted RBP10.81□□□□□ -0.68
CLK3-224ENST00000568605 C6orf141Q5SZD1 244 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 CALHM1Q8IU99 346 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 OR51A4Q8NGJ6 313 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 OR5D14Q8NGL3 314 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 OR13C9Q8NGT0 318 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 OR10AC1Q8NH08 325 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 RPS4Y2Q8TD47 263 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 GATAD2BQ8WXI9 593 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 THRSPQ92748 146 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 Q9H521 79 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 ZCCHC4Q9H5U6 513 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 SNTG1Q9NSN8 517 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 BABAM2Q9NXR7 383 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 RAB26Q9ULW5 256 aa10.81□□□□□ -0.68
CLK3-224ENST00000568605 DVL1O14640 695 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 MAGEB3O15480 346 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 SULT1B1O43704 296 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 SYNGR1O43759 233 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 NOS1APO75052 506 aaPredicted RBP10.8□□□□□ -0.68
CLK3-224ENST00000568605 PLATP00750 562 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 CDK1P06493 297 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ACAA1P09110 424 aaPredicted RBP10.8□□□□□ -0.68
CLK3-224ENST00000568605 PPIAL4GP0DN37 164 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 GABRA2P47869 451 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 POU3F4P49335 361 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 MTCP1P56278 107 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 YIF1BQ5BJH7 314 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ATPAF1Q5TC12 328 aaPredicted RBP10.8□□□□□ -0.68
CLK3-224ENST00000568605 LAIR2Q6ISS4 152 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ZNF841Q6ZN19 808 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ACP7Q6ZNF0 438 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ZNF788Q6ZQV5 615 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 PARP16Q8N5Y8 322 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
CLK3-224ENST00000568605 ANGPTL6Q8NI99 470 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms