RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 HS3ST5Q8IZT8 346 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
NME3-211ENST00000568561 OR5M11Q96RB7 305 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 TEAD3Q99594 435 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 PBOV1Q9GZY1 135 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 HEXA-AS1Q9H8Q6 139 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 SERTAD4Q9NUC0 356 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 USE1Q9NZ43 259 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 OR14J1Q9UGF5 321 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
NME3-211ENST00000568561 A0A0U1RQV5 110 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 SLC1A7O00341 560 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 CST1P01037 141 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 SLC2A5P22732 501 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 PRDX2P32119 198 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 APOFQ13790 326 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 TRIM25Q14258 630 aaKnown RBP12.55□□□□□ -0.4
NME3-211ENST00000568561 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 CCBE1Q6UXH8 406 aaPredicted RBP12.55□□□□□ -0.4
NME3-211ENST00000568561 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 OR5A2Q8NGI9 324 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 R3HDM4Q96D70 268 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 C1orf21Q9H246 121 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 GTF2A1LQ9UNN4 478 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
NME3-211ENST00000568561 KMT2CQ8NEZ4 4911 aaKnown RBP12.55□□□□□ -0.4
NME3-211ENST00000568561 J3QT63 122 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 DCTN3O75935 186 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 FAM107AO95990 144 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 RAP2AP10114 183 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
NME3-211ENST00000568561 HAAOP46952 286 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 TMEM95Q3KNT9 176 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 LDLRAD2Q5SZI1 272 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 KRT74Q7RTS7 529 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 SGCDQ92629 289 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 CITED2Q99967 270 aaPredicted RBP12.54□□□□□ -0.4
NME3-211ENST00000568561 CHID1Q9BWS9 393 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 MUC13Q9H3R2 512 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 ENPP5Q9UJA9 477 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 TCF19Q9Y242 345 aa12.54□□□□□ -0.4
NME3-211ENST00000568561 A0A1W2PPH5 198 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ARRDC5A6NEK1 342 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 A6NIN4 97 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ADARB2-AS1A8MUL3 147 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 MAGEB4O15481 346 aaPredicted RBP12.53□□□□□ -0.4
NME3-211ENST00000568561 GSC2O15499 205 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 NXPH2O95156 264 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 NRASP01111 189 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 IGLV3-1P01715 115 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 HMGN1P05114 100 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 OSMP13725 252 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 PRKACGP22612 351 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 DLX6P56179 175 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ESRRGP62508 458 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 SLC35D3Q5M8T2 416 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ZNF684Q5T5D7 378 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 KCTD18Q6PI47 426 aaPredicted RBP12.53□□□□□ -0.4
NME3-211ENST00000568561 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 Q6ZS46 218 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ASRGL1Q7L266 308 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 REC114Q7Z4M0 266 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ADGRG5Q8IZF4 528 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ZNF561Q8N587 486 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 OR8B4Q96RC9 309 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 NRIP2Q9BQI9 281 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 MROQ9BYG7 248 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
NME3-211ENST00000568561 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
NME3-211ENST00000568561 IKZF2Q9UKS7 526 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 ZNF281Q9Y2X9 895 aa12.53□□□□□ -0.4
NME3-211ENST00000568561 A6NDX4 124 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 CCDC182A6NF36 153 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 FAM90A8PA6NJQ4 464 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 GNGT2O14610 69 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 E2F6O75461 281 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 TTRP02766 147 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 TK1P04183 234 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 ARG1P05089 322 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 CDK5Q00535 292 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 SSX2Q16385 188 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 ASCC1Q8N9N2 400 aaKnown RBP12.52□□□□□ -0.41
NME3-211ENST00000568561 OR4S1Q8NGB4 309 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
NME3-211ENST00000568561 hCG_1809904A0A1W2PP81 198 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 A0A1W2PPE2 198 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms