RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 HPS1Q92902 700 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 GCDHQ92947 438 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 SFXN3Q9BWM7 321 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CDH20Q9HBT6 801 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 NOP16Q9Y3C1 178 aaKnown RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 MYO7BQ6PIF6 2116 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 C7orf66A4D0T2 115 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 RAD51DO75771 328 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 WISP2O76076 250 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 CYB5AP00167 134 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 CGAP01215 116 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MT-ND4P03905 459 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 TMEM225BP0DP42 221 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 GTF2F2P13984 249 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 CD99P14209 185 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MGMTP16455 207 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 VEGFCP49767 419 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 RAB25P57735 213 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MEF2DQ14814 521 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 ZMYND11Q15326 602 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 SLC22A6Q4U2R8 563 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MTFR2Q6P444 385 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 VWA1Q6PCB0 445 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 CRIP3Q6Q6R5 217 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 NPRL2Q8WTW4 380 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 STARD4Q96DR4 205 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 TP63Q9H3D4 680 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-221ENST00000567935 NUDT15Q9NV35 164 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 MPC1Q9Y5U8 109 aa12.58□□□□□ -0.4
COMMD4-221ENST00000567935 PRRG2O14669 202 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 AKR7A2O43488 359 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 CCNKO75909 580 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 LYZL6O75951 148 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 CSTBP04080 98 aaKnown RBP12.57□□□□□ -0.4
COMMD4-221ENST00000567935 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
COMMD4-221ENST00000567935 GNG2P59768 71 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 RBMS2Q15434 407 aaKnown RBP12.57□□□□□ -0.4
COMMD4-221ENST00000567935 MOGAT2Q3SYC2 334 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 STEAP1BQ6NZ63 245 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 FBXW12Q6X9E4 464 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 CD163Q86VB7 1156 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 ZDHHC23Q8IYP9 409 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 SAXO1Q8IYX7 474 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-221ENST00000567935 TMEM104Q8NE00 496 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 PIGCQ92535 297 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 HIST1H2AAQ96QV6 131 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 PTTG3PQ9NZH4 202 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 MYEF2Q9P2K5 600 aaKnown RBP12.57□□□□□ -0.4
COMMD4-221ENST00000567935 STARD10Q9Y365 291 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
COMMD4-221ENST00000567935 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 A0A0B4J293 547 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 FAM230AA0A1W2PPH8 454 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 OR5B21A6NL26 309 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 H3BUI4 141 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 PEX14O75381 377 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 NDUFB6O95139 128 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 CD74P04233 296 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 PTHLHP12272 177 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 SELEP16581 610 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 MPZP25189 248 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 SSTR2P30874 369 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 WNT5AP41221 380 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 MECP2P51608 486 aaKnown RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 TDGF1P3P51864 188 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 FOXF2Q12947 444 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 RSU1Q15404 277 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 OR5A2Q8NGI9 324 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 OR51T1Q8NGJ9 327 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 OR4C16Q8NGL9 310 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 MED30Q96HR3 178 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 MDFIQ99750 246 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 USB1Q9BQ65 265 aaKnown RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 PAPOLGQ9BWT3 736 aaKnown RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 SELENOIQ9C0D9 397 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 C20orf85Q9H1P6 137 aa12.56□□□□□ -0.4
COMMD4-221ENST00000567935 ELL3Q9HB65 397 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-221ENST00000567935 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms