RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	IGKV1D-17	A0A075B6S4	117 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	MDFIC2	A0A1B0GVS7	189 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1B0GW55	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	NKX6-3	A6NJ46	265 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DHRS7C	A6NNS2	312 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DLGAP1	O14490	977 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SIGLEC5	O15389	551 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	HOXA3	O43365	443 aa	Predicted RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	RPP14	O95059	124 aa	Known RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ALPL	P05186	524 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	CRYBA1	P05813	215 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L2	P0CJ85	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L3	P0CJ86	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L4	P0CJ87	422 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L5	P0CJ88	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L6	P0CJ89	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L7	P0CJ90	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	PSG2	P11465	335 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	NDUFB7	P17568	137 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	PEX2	P28328	305 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	CAV3	P56539	151 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	GUCA2A	Q02747	115 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	LSAMP	Q13449	338 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	LRRC36	Q1X8D7	754 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC25A30	Q5SVS4	291 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	RUSC1-AS1	Q66K80	236 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMEM42	Q69YG0	159 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	HAGHL	Q6PII5	290 aa	Predicted RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4L9	Q6RFH8	374 aa	Predicted RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	IZUMO2	Q6UXV1	221 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACP7	Q6ZNF0	438 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	PLEKHG7	Q6ZR37	379 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635		Q6ZSR3	168 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SSX6	Q7RTT6	188 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	VMO1	Q7Z5L0	202 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	CATSPERD	Q86XM0	798 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF573	Q86YE8	665 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	KIR3DL3	Q8N743	410 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	PACRGL	Q8N7B6	248 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR10H4	Q8NGA5	316 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR14K1	Q8NGZ2	314 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SGMS2	Q8NHU3	365 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	C8orf46	Q8TAG6	207 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	H1FX	Q92522	213 aa	Known RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	UBE2F	Q969M7	185 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	EME1	Q96AY2	570 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	HRASLS5	Q96KN8	279 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	GAFA1	Q96PS6	74 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	NR1H4	Q96RI1	486 aa	Predicted RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC29A1	Q99808	456 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DCTN5	Q9BTE1	182 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	C9orf16	Q9BUW7	83 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ADI1	Q9BV57	179 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF747	Q9BV97	191 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACOXL	Q9NUZ1	547 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	IMPAD1	Q9NX62	359 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	ONECUT1	Q9UBC0	465 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	DUX4	Q9UBX2	424 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	RAB26	Q9ULW5	256 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635	MGAM2	Q2M2H8	2515 aa		5.7	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1B0GVG6	124 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1B0GVI7	797 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	PQLC2L	A1A4F0	135 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635		A6NIN4	97 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	RFPL4A	A6NLU0	287 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	POM121C	A8CG34	1229 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	RFPL4AL1	F8VTS6	287 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	DENR	O43583	198 aa	Known RBP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	NOS1AP	O75052	506 aa	Predicted RBP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	APOL3	O95236	402 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	TFF1	P04155	84 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SELL	P14151	372 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	CCL1	P22362	96 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	PRDX2	P32119	198 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	HAAO	P46952	286 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	HSPA13	P48723	471 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SNRPG	P62308	76 aa	Known RBP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	OCLN	Q16625	522 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	DGUOK	Q16854	277 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	ODF4	Q2M2E3	257 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SMIM21	Q3B7S5	101 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZIK1	Q3SY52	487 aa	Predicted RBP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	MEDAG	Q5VYS4	303 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	METAP1D	Q6UB28	335 aa	Predicted RBP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SHISA2	Q6UWI4	295 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	KCTD20	Q7Z5Y7	419 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	PDZD9	Q8IXQ8	264 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMEM86B	Q8N661	226 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635		Q8N7P7	452 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	POC1A	Q8NBT0	407 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNRF1	Q8ND25	227 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	CCDC54	Q8NEL0	328 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	TBC1D15	Q8TC07	691 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	NPRL2	Q8WTW4	380 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SSMEM1	Q8WWF3	244 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	RORB	Q92753	470 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SDSL	Q96GA7	329 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	GPR173	Q9NS66	373 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	TNFRSF19	Q9NS68	423 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms