RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MXD1Q05195 221 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 FAM27D1Q5T7N8 215 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 BHLHE23Q8NDY6 225 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 SEMA6DQ8NFY4 1073 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 OR10AC1Q8NH08 325 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 ITLN1Q8WWA0 313 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 S100ZQ8WXG8 99 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 FOXRED1Q96CU9 486 aaPredicted RBP11.34□□□□□ -0.59
CLK3-218ENST00000566926 CPNE2Q96FN4 548 aaPredicted RBP11.34□□□□□ -0.59
CLK3-218ENST00000566926 REPIN1Q9BWE0 567 aaKnown RBP11.34□□□□□ -0.59
CLK3-218ENST00000566926 PPIL3Q9H2H8 161 aaKnown RBP11.34□□□□□ -0.59
CLK3-218ENST00000566926 ZCCHC4Q9H5U6 513 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 NARFLQ9H6Q4 476 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 V9GYS6 101 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 ANXA2P2A6NMY6 339 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 CD300LBA8K4G0 201 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 AIPO00170 330 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 IFNA2P01563 188 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 IGFBP3P17936 291 aaPredicted RBP11.33□□□□□ -0.6
CLK3-218ENST00000566926 RAB3AP20336 220 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 IL2RGP31785 369 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
CLK3-218ENST00000566926 ZNF92Q03936 586 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 RIPPLY1Q0D2K3 151 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 OR8B8Q15620 311 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 GLT8D1Q68CQ7 371 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 UTS2BQ765I0 119 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 GLCCI1Q86VQ1 547 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 CELF2-AS1Q8N7Q2 184 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 OR14K1Q8NGZ2 314 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 ERGIC1Q969X5 290 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 PPP1R14AQ96A00 147 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 SGK3Q96BR1 496 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
CLK3-218ENST00000566926 MEGF10Q96KG7 1140 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 TREM2Q9NZC2 230 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 ABRACLQ9P1F3 81 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 ZNF319Q9P2F9 582 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 ADAM30Q9UKF2 790 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 NPTNQ9Y639 398 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 CACNG2Q9Y698 323 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 V9GY05 133 aa11.33□□□□□ -0.6
CLK3-218ENST00000566926 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 A0A1W2PPK0 400 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 SHISA3A0PJX4 238 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 ISPDA4D126 451 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 LRRC30A6NM36 301 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 MAGEB3O15480 346 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 GMDSO60547 372 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 LMO4P61968 165 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 GFOD2Q3B7J2 385 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 GLYATL3Q5SZD4 288 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 CSNK2A3Q8NEV1 391 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 OR10AD1Q8NGE0 317 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 OR6Q1Q8NGQ2 317 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 OR51F2Q8NH61 342 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 FGGYQ96C11 551 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 CMTM3Q96MX0 182 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 CHST5Q9GZS9 411 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
CLK3-218ENST00000566926 TMEM138Q9NPI0 162 aa11.32□□□□□ -0.6
CLK3-218ENST00000566926 MRPL15Q9P015 296 aaKnown RBP11.32□□□□□ -0.6
CLK3-218ENST00000566926 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
CLK3-218ENST00000566926 hCG_38984A0A1B0GV85 526 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 WNT9BO14905 357 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 MLNRO43193 412 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 SULT1B1O43704 296 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 ALDOBP05062 364 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 MSMBP08118 114 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 IRF2P14316 349 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 OR8G1Q15617 311 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 ZNF181Q2M3W8 571 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 TMEM155Q4W5P6 130 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 CEP78Q5JTW2 689 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 KRT74Q7RTS7 529 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
CLK3-218ENST00000566926 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 OR1M1Q8NGA1 313 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 OR2AE1Q8NHA4 323 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 TBC1D15Q8TC07 691 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 SPSB1Q96BD6 273 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms