RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 TMEM236Q5W0B7 351 aa22.59■■□□□ 1.21
UBFD1-206ENST00000566669 CALHM1Q8IU99 346 aa22.59■■□□□ 1.21
UBFD1-206ENST00000566669 RANBP3Q9H6Z4 567 aaPredicted RBP22.59■■□□□ 1.21
UBFD1-206ENST00000566669 TCRBV3S1A0A5B6 114 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 LOC110117498-PIK3R3F6TDL0 507 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 ANGPTL7O43827 346 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 FAHP16930 419 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 HCCSP53701 268 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 RPL31P62899 125 aaKnown RBP22.58■■□□□ 1.21
UBFD1-206ENST00000566669 FAHD1Q6P587 224 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 OR4C13Q8NGP0 309 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 SSX3Q99909 188 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 PPA2Q9H2U2 334 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 USE1Q9NZ43 259 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 ENOPH1Q9UHY7 261 aa22.58■■□□□ 1.21
UBFD1-206ENST00000566669 CCDC182A6NF36 153 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 RFPL4AA6NLU0 287 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 RFPL4AL1F8VTS6 287 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 H3BUX3 64 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 MRPL3P09001 348 aaKnown RBP22.57■■□□□ 1.2
UBFD1-206ENST00000566669 PGA5P0DJD9 388 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 HAAOP46952 286 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 EGR3Q06889 387 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 PTGES3Q15185 160 aaKnown RBP22.57■■□□□ 1.2
UBFD1-206ENST00000566669 LRRC75BQ2VPJ9 315 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 TMEM42Q69YG0 159 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 SLC35E4Q6ICL7 350 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 Q6ZTK2 550 aa22.57■■□□□ 1.2
UBFD1-206ENST00000566669 A0A0G2JK05 382 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 PSMD9O00233 223 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 PRDX2P32119 198 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 KIR2DS4P43632 304 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 BCL2L15Q5TBC7 163 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 NXNL2Q5VZ03 156 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 ZNF322Q6U7Q0 402 aaPredicted RBP22.56■■□□□ 1.2
UBFD1-206ENST00000566669 MEPCEQ7L2J0 689 aaKnown RBP22.56■■□□□ 1.2
UBFD1-206ENST00000566669 R4GMQ9 66 aa22.56■■□□□ 1.2
UBFD1-206ENST00000566669 NXPH2O95156 264 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 TTRP02766 147 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 CSF1P09603 554 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 LGALS4P56470 323 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 HERPUD1Q15011 391 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 HCP5Q6MZN7 132 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 ELMOD2Q8IZ81 293 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 PNKDQ8N490 385 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 NRIP2Q9BQI9 281 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 ELL3Q9HB65 397 aaPredicted RBP22.55■■□□□ 1.2
UBFD1-206ENST00000566669 POMPQ9Y244 141 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 SNX5Q9Y5X3 404 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 V9GYS6 101 aa22.55■■□□□ 1.2
UBFD1-206ENST00000566669 TFF1P04155 84 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 MPZP25189 248 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 DLX1P56177 255 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 ERVFRD-1P60508 538 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 CXCR4P61073 352 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 PRB3Q04118 309 aaPredicted RBP22.54■■□□□ 1.2
UBFD1-206ENST00000566669 Q6ZSR3 168 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 GID4Q8IVV7 300 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 CCDC54Q8NEL0 328 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 OR2T6Q8NHC8 308 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 CDCA4Q9BXL8 241 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 C19orf12Q9NSK7 152 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 CLN6Q9NWW5 311 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 GTF2A1LQ9UNN4 478 aa22.54■■□□□ 1.2
UBFD1-206ENST00000566669 PQLC2LA1A4F0 135 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 ZNF670-ZNF695F2Z2N8 137 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 TMEM200BQ69YZ2 307 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 SLC35F2Q8IXU6 374 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 CD177Q8N6Q3 437 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 PKIBQ9C010 78 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 NPFFR1Q9GZQ6 430 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 HES4Q9HCC6 221 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 OR52A1Q9UKL2 312 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 COPS3Q9UNS2 423 aa22.53■■□□□ 1.2
UBFD1-206ENST00000566669 PRKYO43930 277 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 SRSF10O75494 262 aaKnown RBP22.52■■□□□ 1.2
UBFD1-206ENST00000566669 DNAJC8O75937 253 aaPredicted RBP22.52■■□□□ 1.2
UBFD1-206ENST00000566669 RBP4P02753 201 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 MFGE8Q08431 387 aaPredicted RBP22.52■■□□□ 1.2
UBFD1-206ENST00000566669 MKXQ8IYA7 352 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 OR2T27Q8NH04 317 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 TMEM163Q8TC26 289 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 KRT84Q9NSB2 600 aa22.52■■□□□ 1.2
UBFD1-206ENST00000566669 TSPAN15O95858 294 aa22.51■■□□□ 1.19
UBFD1-206ENST00000566669 DAPP51397 102 aa22.51■■□□□ 1.19
UBFD1-206ENST00000566669 EFNB2P52799 333 aa22.51■■□□□ 1.19
UBFD1-206ENST00000566669 IL24Q13007 206 aa22.51■■□□□ 1.19
UBFD1-206ENST00000566669 UTP4Q969X6 686 aaKnown RBP22.51■■□□□ 1.19
UBFD1-206ENST00000566669 FOXRED1Q96CU9 486 aaPredicted RBP22.51■■□□□ 1.19
UBFD1-206ENST00000566669 SLC7A11Q9UPY5 501 aa22.51■■□□□ 1.19
UBFD1-206ENST00000566669 VGLL3A8MV65 326 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 PRR32B1ATL7 298 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 SYNGR1O43759 233 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 TK1P04183 234 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 EFNB1P98172 346 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 AADACL4Q5VUY2 407 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 SLX4IPQ5VYV7 408 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 ASRGL1Q7L266 308 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 OR14K1Q8NGZ2 314 aa22.5■■□□□ 1.19
UBFD1-206ENST00000566669 APOL4Q9BPW4 351 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms