RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LSM1O15116 133 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 EIF3HO15372 352 aaKnown RBP eCLIP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CLOCKO15516 846 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF264O43296 627 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CXCL13O43927 109 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TPST1O60507 370 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TPST2O60704 377 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SHOX2O60902 331 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CRCPO75575 148 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 UPK3AO75631 287 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TNFSF13O75888 250 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LYZL6O75951 148 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 GLCEO94923 617 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 KCNK2O95069 426 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RCBTB2O95199 551 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SNX4O95219 450 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OTCP00480 354 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CD8AP01732 235 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 HMGN2P05204 90 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 BPGMP07738 259 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SOD3P08294 240 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RPS17P08708 135 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 UBTFL6P0CB48 400 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR12D1P0DN82 309 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 THRBP10828 461 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MYL2P10916 166 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PRPS2P11908 318 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CCL2P13500 99 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 IGLL1P15814 213 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 HNF1AP20823 631 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TBXA2RP21731 343 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 IL10P22301 178 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 COL8A2P25067 703 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LOXP28300 417 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 HMOX2P30519 316 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 EVI2BP34910 448 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MPIP34949 423 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PHBP35232 272 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 UGT2B10P36537 528 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PPICP45877 212 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RPL29P47914 159 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CCT3P49368 545 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 SERPINB8P50452 374 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF83P51522 516 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MAGOHP61326 146 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 RPL38P63173 70 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 HBA1P69905 142 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MRPS22P82650 360 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CAV1Q03135 178 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF117Q03924 483 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 TGM3Q08188 693 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PLCXD2Q0VAA5 305 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 STX3Q13277 289 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SELPLGQ14242 412 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LASP1Q14847 261 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 EBPQ15125 230 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 IMPG1Q17R60 797 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZSWIM7Q19AV6 140 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 WHAMMP3Q1A5X7 153 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PGGHGQ32M88 737 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ALKBH6Q3KRA9 238 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 VPS26BQ4G0F5 336 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ACSF3Q4G176 576 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 SPRNQ5BIV9 151 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CDKL4Q5MAI5 379 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PHYHD1Q5SRE7 291 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PDZK1Q5T2W1 519 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 C1QTNF12Q5T7M4 302 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 C1orf185Q5T7R7 199 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CPTPQ5TA50 214 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RAET1LQ5VY80 246 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CARD17Q5XLA6 110 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR52E8Q6IFG1 317 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PLBD1Q6P4A8 553 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TNFAIP8L2Q6P589 184 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 OPN5Q6U736 354 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ENPP6Q6UWR7 440 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZYG11AQ6WRX3 759 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 STAC2Q6ZMT1 411 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF621Q6ZSS3 439 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TRMT10CQ7L0Y3 403 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 NEGR1Q7Z3B1 354 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 P4HA3Q7Z4N8 544 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SLC22A16Q86VW1 577 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 VRK2Q86Y07 508 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 PLCZ1Q86YW0 608 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RBM45Q8IUH3 476 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 NUDCD3Q8IVD9 361 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 FUNDC1Q8IVP5 155 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CLYBLQ8N0X4 340 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 UBE2J2Q8N2K1 259 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LRRC25Q8N386 305 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 TCAIMQ8N3R3 496 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZCCHC7Q8N3Z6 543 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 LIX1Q8N485 282 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LINC00471Q8N535 108 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TBC1D19Q8N5T2 526 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CLDN22Q8N7P3 220 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ANKFN1Q8N957 763 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms