RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 RNF224P0DH78 156 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 PITPNBP48739 271 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 ZSCAN4Q8NAM6 433 aaPredicted RBP26.01■■□□□ 1.75
CTCF-203ENST00000566078 OR2Z1Q8NG97 314 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 OR4M2Q8NGB6 313 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 SRRQ9GZT4 340 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 USP9XQ93008 2570 aaPredicted RBP26■■□□□ 1.75
CTCF-203ENST00000566078 TMEM210A6NLX4 147 aa26■■□□□ 1.75
CTCF-203ENST00000566078 KDM4BO94953 1096 aa26■■□□□ 1.75
CTCF-203ENST00000566078 PTBP1P26599 531 aaKnown RBP eCLIP26■■□□□ 1.75
CTCF-203ENST00000566078 PYDC2Q56P42 97 aa26■■□□□ 1.75
CTCF-203ENST00000566078 TMEM69Q5SWH9 247 aa26■■□□□ 1.75
CTCF-203ENST00000566078 BAIAP2L2Q6UXY1 529 aa26■■□□□ 1.75
CTCF-203ENST00000566078 SPERTQ8NA61 448 aa26■■□□□ 1.75
CTCF-203ENST00000566078 ZFAND2BQ8WV99 257 aa26■■□□□ 1.75
CTCF-203ENST00000566078 PHF21AQ96BD5 680 aa26■■□□□ 1.75
CTCF-203ENST00000566078 DOPEY1Q5JWR5 2465 aa26■■□□□ 1.75
CTCF-203ENST00000566078 HTR3BO95264 441 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 MGMTP16455 207 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 SLAMF9Q96A28 289 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 C14orf119Q9NWQ9 140 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 IL36GQ9NZH8 169 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 IGHV3-64DA0A0J9YX35 117 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 CYB5AP00167 134 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 CSTBP04080 98 aaKnown RBP25.99■■□□□ 1.75
CTCF-203ENST00000566078 IGFBP2P18065 325 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 NR4A2P43354 598 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 DCTN2Q13561 401 aaKnown RBP25.99■■□□□ 1.75
CTCF-203ENST00000566078 GPR176Q14439 515 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 FAM76BQ5HYJ3 339 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 MKXQ8IYA7 352 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 SAXO1Q8IYX7 474 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 ACBD4Q8NC06 268 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 FAM222BQ8WU58 562 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 SDHCQ99643 169 aaPredicted RBP25.99■■□□□ 1.75
CTCF-203ENST00000566078 TMEM204Q9BSN7 226 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 PKIBQ9C010 78 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 DIABLOQ9NR28 239 aa25.99■■□□□ 1.75
CTCF-203ENST00000566078 MRPS7Q9Y2R9 242 aaKnown RBP25.99■■□□□ 1.75
CTCF-203ENST00000566078 METTL21EPA6NDL7 271 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 WIPF3A6NGB9 483 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 J3QT63 122 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 SYNGR1O43759 233 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 ZNF780AO75290 641 aaPredicted RBP25.98■■□□□ 1.75
CTCF-203ENST00000566078 GRPP07492 148 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 ZNF154Q13106 437 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 PYHIN1Q6K0P9 492 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 C16orf87Q6PH81 154 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 ELMOD3Q96FG2 381 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 LPAR5Q9H1C0 372 aa25.98■■□□□ 1.75
CTCF-203ENST00000566078 XRCC3O43542 346 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 MPZP25189 248 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 SERPINF1P36955 418 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 ZNF81P51508 661 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 MZT1Q08AG7 82 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 IL24Q13007 206 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 MAB21L1Q13394 359 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 CDH24Q86UP0 819 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 BATF2Q8N1L9 274 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 SCCPDHQ8NBX0 429 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 LILRB1Q8NHL6 650 aaPredicted RBP25.97■■□□□ 1.75
CTCF-203ENST00000566078 NICN1Q9BSH3 213 aa25.97■■□□□ 1.75
CTCF-203ENST00000566078 CISD1Q9NZ45 108 aaKnown RBP25.97■■□□□ 1.75
CTCF-203ENST00000566078 SPRY3O43610 288 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 BCL3P20749 454 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 TAS2R20P59543 309 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 RPS27AP62979 156 aaKnown RBP25.96■■□□□ 1.75
CTCF-203ENST00000566078 ZNF672Q499Z4 452 aaPredicted RBP25.96■■□□□ 1.75
CTCF-203ENST00000566078 SNX29P2Q8IUI4 249 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 AQP3Q92482 292 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 URM1Q9BTM9 101 aaKnown RBP25.96■■□□□ 1.75
CTCF-203ENST00000566078 SELENOIQ9C0D9 397 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 SFTPBP07988 381 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 APOBEC3AP31941 199 aaPredicted RBP25.96■■□□□ 1.75
CTCF-203ENST00000566078 MOGAT2Q3SYC2 334 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 PRAMEF6Q5VXH4 476 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 TMEM200AQ86VY9 491 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 GDPD1Q8N9F7 314 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 ABHD1Q96SE0 405 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 MTCH1Q9NZJ7 389 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 RABL2AQ9UBK7 228 aaPredicted RBP25.96■■□□□ 1.75
CTCF-203ENST00000566078 RABL2BQ9UNT1 228 aa25.96■■□□□ 1.75
CTCF-203ENST00000566078 HRNRQ86YZ3 2850 aaPredicted RBP25.95■■□□□ 1.74
CTCF-203ENST00000566078 CACNA1DQ01668 2161 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 TRAPPC2LH3BP13 241 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 CD200P41217 278 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 NPBWR2P48146 333 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 PTH2RP49190 550 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 VEGFCP49767 419 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 PITPNAQ00169 270 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 OR51T1Q8NGJ9 327 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 CCDC32Q9BV29 185 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 PCDHB16Q9NRJ7 776 aa25.95■■□□□ 1.74
CTCF-203ENST00000566078 PKDREJQ9NTG1 2253 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 A0A0A6YYD4 124 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 A0A0A6YYH2 397 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 A6NJ64 397 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 RHBDL1O75783 438 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 GTF2F2P13984 249 aa25.94■■□□□ 1.74
CTCF-203ENST00000566078 POLDIP2Q9Y2S7 368 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms