RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MICBQ29980 383 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 RNLSQ5VYX0 342 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF841Q6ZN19 808 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 UTS2BQ765I0 119 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 NANOGP1Q8N7R0 232 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 SEH1LQ96EE3 360 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 DUSP21Q9H596 190 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 SLC7A11Q9UPY5 501 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 TPRKBQ9Y3C4 175 aa11.52□□□□□ -0.57
HERPUD1-210ENST00000565966 IGHV3OR15-7A0A075B7D8 119 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 IGKV1-9A0A0C4DH69 117 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 J3QT63 122 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 MYL12BO14950 172 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 AKR7A2O43488 359 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 ADAM20O43506 726 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 HAAOP46952 286 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 WNT4P56705 351 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 BTNL3Q6UXE8 466 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF573Q86YE8 665 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF671Q8TAW3 534 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 NANPQ8TBE9 248 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 RAB40AQ8WXH6 277 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 C12orf43Q96C57 262 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 SMIM19Q96E16 107 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF184Q99676 751 aaPredicted RBP11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 CDCA4Q9BXL8 241 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 WDR13Q9H1Z4 485 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 OPN4Q9UHM6 478 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 ERGIC3Q9Y282 383 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 AUP1Q9Y679 476 aa11.51□□□□□ -0.57
HERPUD1-210ENST00000565966 IGKV1-27A0A075B6S5 117 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 SYNGR1O43759 233 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 ADRA2CP18825 462 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 ATF1P18846 271 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 CRHBPP24387 322 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 MPZP25189 248 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 FUT6P51993 359 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 GMFBP60983 142 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 PAX2Q02962 417 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 PAX8Q06710 450 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 IRF3Q14653 427 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 CNN3Q15417 329 aaKnown RBP11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 CD276Q5ZPR3 534 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 CALHM1Q8IU99 346 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 ZFP41Q8N8Y5 198 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 TSEN15Q8WW01 171 aaKnown RBP11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 MRI1Q9BV20 369 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 DNAJB11Q9UBS4 358 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
HERPUD1-210ENST00000565966 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 DENRO43583 198 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 PRKACBP22694 351 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 GLRA1P23415 457 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 AZGP1P25311 298 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 TAS2R43P59537 309 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 RBM48Q5RL73 367 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 STUMQ69YW2 141 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 SLC36A1Q7Z2H8 476 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 PARP16Q8N5Y8 322 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 POC1AQ8NBT0 407 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 GPR148Q8TDV2 347 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 GHSRQ92847 366 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 DACT3Q96B18 629 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 BORCS8Q96FH0 119 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF488Q96MN9 340 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 NUDT16L1Q9BRJ7 211 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 MND1Q9BWT6 205 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 PKIBQ9C010 78 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 ZCCHC4Q9H5U6 513 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 SNTG1Q9NSN8 517 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 POLDIP2Q9Y2S7 368 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF281Q9Y2X9 895 aa11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-210ENST00000565966 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 DVL1O14640 695 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 RGS10O43665 173 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 NOS1APO75052 506 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms