RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CMTM4Q8IZR5 234 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 WDFY2Q96P53 400 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 PCGF1Q9BSM1 259 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 ZMAT3Q9HA38 289 aaKnown RBP16.44■□□□□ 0.22
CMTM3-211ENST00000565922 AMBNQ9NP70 447 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 FRRS1LQ9P0K9 344 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 SLC25A10Q9UBX3 287 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-211ENST00000565922 KPTNQ9Y664 436 aa16.44■□□□□ 0.22
CMTM3-211ENST00000565922 H3BSH0 61 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 ACAA1P09110 424 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-211ENST00000565922 AMY2BP19961 511 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 MPZP25189 248 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 CAV3P56539 151 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 ALKBH1Q13686 389 aaKnown RBP16.43■□□□□ 0.22
CMTM3-211ENST00000565922 TUSC1Q2TAM9 212 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 ZNF691Q5VV52 312 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 ACP7Q6ZNF0 438 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 LHFPL3Q86UP9 236 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 FAM216AQ8WUB2 273 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 APH1BQ8WW43 257 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 PELI1Q96FA3 418 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 BORCS8Q96FH0 119 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 GAFA1Q96PS6 74 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 HHLA2Q9UM44 414 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 MYRFQ9Y2G1 1151 aa16.43■□□□□ 0.22
CMTM3-211ENST00000565922 A0A1B0GW55 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 FAM230AA0A1W2PPH8 454 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 SYNGR1O43759 233 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 NXPH2O95156 264 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L2P0CJ85 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L3P0CJ86 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L4P0CJ87 422 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L5P0CJ88 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L6P0CJ89 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L7P0CJ90 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 PSG2P11465 335 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 MMP9P14780 707 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 ZNF20P17024 532 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 PEX2P28328 305 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 IL24Q13007 206 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 IL18R1Q13478 541 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 UBE2V2Q15819 145 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4L9Q6RFH8 374 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DHRSXQ8N5I4 330 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 KIR3DL3Q8N743 410 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 ZNF676Q8N7Q3 588 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 SIGLECL1Q8N7X8 197 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 OR52I1Q8NGK6 324 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 TRMT10AQ8TBZ6 339 aaKnown RBP16.42■□□□□ 0.22
CMTM3-211ENST00000565922 CYGBQ8WWM9 190 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 H1FXQ92522 213 aaKnown RBP16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DCTN5Q9BTE1 182 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 VCXQ9H320 206 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 DUX4Q9UBX2 424 aa16.42■□□□□ 0.22
CMTM3-211ENST00000565922 IGKV1D-17A0A075B6S4 117 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 SLC1A7O00341 560 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 FCN3O75636 299 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 CCDC159P0C7I6 412 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 OCM2P0CE71 109 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 OCMP0CE72 109 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-211ENST00000565922 NDUFB7P17568 137 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 NANOS3P60323 173 aaKnown RBP16.41■□□□□ 0.22
CMTM3-211ENST00000565922 ARF6P62330 175 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 ACTG1P63261 375 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 ELF3P78545 371 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-211ENST00000565922 DGUOKQ16854 277 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 UTS2BQ765I0 119 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-211ENST00000565922 LY6G5BQ8NDX9 201 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 DNAAF1Q8NEP3 725 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 C8orf46Q8TAG6 207 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 NPRL2Q8WTW4 380 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 RNF166Q96A37 237 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-211ENST00000565922 SDSLQ96GA7 329 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 NRIP2Q9BQI9 281 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 JAM3Q9BX67 310 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 COMMD4Q9H0A8 199 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 SIRPDQ9H106 197 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 NEK6Q9HC98 313 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 ZNF222Q9UK12 451 aa16.41■□□□□ 0.22
CMTM3-211ENST00000565922 IGHV3OR16-10A0A075B7F0 116 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 TMEM212A6NML5 194 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 WBP4O75554 376 aaKnown RBP16.4■□□□□ 0.22
CMTM3-211ENST00000565922 CYB5AP00167 134 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 SFTPBP07988 381 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 PRKACBP22694 351 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 DCKP27707 260 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 RBP2P50120 134 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 GBX2P52951 348 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-211ENST00000565922 MED21Q13503 144 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 CALHM1Q8IU99 346 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 BCL6BQ8N143 479 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-211ENST00000565922 ZNF561Q8N587 486 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 ZDHHC22Q8N966 263 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 TMEM185AQ8NFB2 350 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 OR13C3Q8NGS6 347 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 GATAD2BQ8WXI9 593 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms