RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 KCNK7Q9Y2U2 307 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CNTRLQ7Z7A1 2325 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 NCKAP5O14513 1909 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A1W2PNU3 283 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 PLSCR5A0PG75 271 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 PMS2P1A4D2B8 440 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 OR6C6A6NF89 314 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 STMND1H3BQB6 276 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 M0QYG6 137 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 CA11O75493 328 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 FARS2O95363 451 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 IFNA7P01567 189 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 HIST1H1DP16402 221 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 NFYAP23511 347 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 STARP49675 285 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 LUMP51884 338 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM50BP56557 158 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 GNG2P59768 71 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 TSPAN5P62079 268 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 CXADRP78310 365 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 SFRP5Q5T4F7 317 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 CDPF1Q6NVV7 123 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 LPCAT3Q6P1A2 487 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 FTMTQ8N4E7 242 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 C12orf45Q8N5I9 185 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF680Q8NEM1 530 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 SEMA6DQ8NFY4 1073 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 OR52B4Q8NGK2 314 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 OR13C8Q8NGS7 320 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 ROBO4Q8WZ75 1007 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 SPSB1Q96BD6 273 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 SGK3Q96BR1 496 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 S100A13Q99584 98 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 TM2D1Q9BX74 207 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF703Q9H7S9 590 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 HEXA-AS1Q9H8Q6 139 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 CA10Q9NS85 328 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 ATPIF1Q9UII2 106 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 PIGLQ9Y2B2 252 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 FRYLO94915 3013 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 NCOR1O75376 2440 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 RTTNQ86VV8 2226 aa6.32□□□□□ -1.4
HERPUD1-209ENST00000564678 PINLYPA6NC86 204 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 PCNX2A6NKB5 2137 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 F5H5P2 479 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC22A5O76082 557 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 IFNA6P05013 189 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 GNB3P16520 340 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 HLA-GP17693 338 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SDHBP21912 280 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 OR3A4PP47883 348 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CAMLGP49069 296 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF81P51508 661 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 RPS27AP62979 156 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 UBE2V2Q15819 145 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 HYAL4Q2M3T9 481 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 VAX1Q5SQQ9 334 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC25A42Q86VD7 318 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF100Q8IYN0 542 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ARRDC1Q8N5I2 433 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM104Q8NE00 496 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SPACA5Q96QH8 159 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CHIAQ9BZP6 476 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CHST6Q9GZX3 395 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 GPR35Q9HC97 309 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 PCSK5Q92824 1860 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 AHCTF1Q8WYP5 2266 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A0A6YYD4 124 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 A6NL46 340 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CEACAM18A8MTB9 384 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SERPINE3A8MV23 424 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 MCRIP1C9JLW8 97 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 RPL36A-HNRNPH2H7BZ11 118 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 MFNGO00587 321 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SOCS1O15524 211 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 TSC22D2O75157 780 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 MRPL33O75394 65 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CRTAPO75718 401 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 TOXO94900 526 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 FCER2P06734 321 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 GRPP07492 148 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 DBHP09172 617 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF32P17041 273 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 PRKACBP22694 351 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ANOS1P23352 680 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ITGA3P26006 1051 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CD82P27701 267 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 LHX2P50458 406 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 H2BFSP57053 126 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 UBE2MP61081 183 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 FGL1Q08830 312 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 OR1C1Q15619 314 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CEACAM16Q2WEN9 425 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SCGB2B2Q4G0G5 96 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 PLAC9Q5JTB6 97 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CRIP3Q6Q6R5 217 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 GVQW1Q8N7I0 195 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms