RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ACAA1P09110 424 aaPredicted RBP15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 PSG2P11465 335 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 BPIFB3P59826 476 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 ACTG1P63261 375 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 GALEQ14376 348 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 PDCD1Q15116 288 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 C9orf139Q6ZV77 190 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 ZDHHC22Q8N966 263 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 C10orf35Q96D05 121 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 C4orf36Q96KX1 117 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 GAFA1Q96PS6 74 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 ALG8Q9BVK2 526 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 ESM1Q9NQ30 184 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 FRRS1LQ9P0K9 344 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 SLC25A10Q9UBX3 287 aaPredicted RBP15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 SIGLEC5O15389 551 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 SELLP14151 372 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 MMP9P14780 707 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 NDUFB7P17568 137 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 RAB40BQ12829 278 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 BAMBIQ13145 260 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 UBE2V2Q15819 145 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 SMIM21Q3B7S5 101 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 KLHL22Q53GT1 634 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 LPCAT4Q643R3 524 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 FDX2Q6P4F2 183 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 BRD3OSQ6XYD6 125 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 ACP7Q6ZNF0 438 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 ANGPTL5Q86XS5 388 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 LY6G5BQ8NDX9 201 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 NPRL2Q8WTW4 380 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 RNF166Q96A37 237 aaPredicted RBP15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 DMRTB1Q96MA1 342 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF488Q96MN9 340 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 DCTN5Q9BTE1 182 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 SIRPDQ9H106 197 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 C8orf4Q9NR00 106 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 INPP5EQ9NRR6 644 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 ONECUT1Q9UBC0 465 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 MYRFQ9Y2G1 1151 aa15.16■□□□□ 0.02
SYNGR3-204ENST00000564642 IGKV1D-17A0A075B6S4 117 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 NOS1APO75052 506 aaPredicted RBP15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 NXPH2O95156 264 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 ISG15P05161 165 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 PGA5P0DJD9 388 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 CCR9P51686 369 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 FUT6P51993 359 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 CAV3P56539 151 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 UBA52P62987 128 aaKnown RBP15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 RCN1Q15293 331 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 DGUOKQ16854 277 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 TUSC1Q2TAM9 212 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 EGFL6Q8IUX8 553 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 CMTM4Q8IZR5 234 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNRF1Q8ND25 227 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 PP6455Q8WZ26 134 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 GCDHQ92947 438 aaPredicted RBP15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 PELI1Q96FA3 418 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 BORCS8Q96FH0 119 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF48Q96MX3 618 aaPredicted RBP15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 TBX15Q96SF7 602 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 PKIBQ9C010 78 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 CHST5Q9GZS9 411 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 MRPS18AQ9NVS2 196 aaKnown RBP15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 KPTNQ9Y664 436 aa15.15■□□□□ 0.02
SYNGR3-204ENST00000564642 RFPL4AA6NLU0 287 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 RFPL4AL1F8VTS6 287 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 WIPF1O43516 503 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 IGHA1P01876 353 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF20P17024 532 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 NANOS3P60323 173 aaKnown RBP15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 IL24Q13007 206 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 ALKBH1Q13686 389 aaKnown RBP15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 CNN3Q15417 329 aaKnown RBP15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 TTC23Q5W5X9 447 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 C12orf54Q6X4T0 127 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 CALHM1Q8IU99 346 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 SYS1Q8N2H4 156 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 PACRGLQ8N7B6 248 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF676Q8N7Q3 588 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 TMEM185AQ8NFB2 350 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 OR52I1Q8NGK6 324 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 APH1BQ8WW43 257 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 CYGBQ8WWM9 190 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 GATAD2BQ8WXI9 593 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 LHX4Q969G2 390 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 ZDHHC16Q969W1 377 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 FGGYQ96C11 551 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 DUX5Q96PT3 197 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 ERVK13-1Q9NX77 482 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 HHLA2Q9UM44 414 aa15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 SOX21Q9Y651 276 aaPredicted RBP15.14■□□□□ 0.01
SYNGR3-204ENST00000564642 CENPVL3A0A0U1RRI6 287 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 A0A1W2PQ09 198 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 DNAJC9-AS1A6NH13 148 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 PRTN3P24158 256 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 MPZP25189 248 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 PRDX2P32119 198 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 CAPZA1P52907 286 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF691Q5VV52 312 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms