RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SPRY1O43609 319 aaPredicted RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 CRTAPO75718 401 aaPredicted RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 PAHP00439 452 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 APOA1P02647 267 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 GRPP07492 148 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 SERPINA2P20848 420 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 GATA4P43694 442 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 ART1P52961 327 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 SLC22A6Q4U2R8 563 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FAM76BQ5HYJ3 339 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 SPANXN2Q5MJ10 180 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FIP1L1Q6UN15 594 aaKnown RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 BAIAP2L2Q6UXY1 529 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 TMEM200AQ86VY9 491 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 LAX1Q8IWV1 398 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 OR6Q1Q8NGQ2 317 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 OR11L1Q8NGX0 322 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 OR51F2Q8NH61 342 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 S100ZQ8WXG8 99 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 RAB40AQ8WXH6 277 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 GTF3AQ92664 365 aaKnown RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 HPS1Q92902 700 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 SLC25A28Q96A46 364 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 TMEM59Q9BXS4 323 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FGF23Q9GZV9 251 aaPredicted RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 TLNRD1Q9H1K6 362 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 CLEC4MQ9H2X3 399 aaPredicted RBP10.89□□□□□ -0.67
CLK3-214ENST00000564096 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 RHBDL2Q9NX52 303 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 OR5V1Q9UGF6 321 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 MYO18BQ8IUG5 2567 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 TMEM272A0A1B0GTI8 110 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 ANGPTL7O43827 346 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 PTBP3O95758 552 aaKnown RBP10.88□□□□□ -0.67
CLK3-214ENST00000564096 VSIG8P0DPA2 414 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 GTF2F2P13984 249 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 C2orf76Q3KRA6 126 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 PRAMEF6Q5VXH4 476 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 WDR86Q86TI4 376 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 CDH24Q86UP0 819 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 DTX2Q86UW9 622 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 CALHM1Q8IU99 346 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 SCCPDHQ8NBX0 429 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 ITLN1Q8WWA0 313 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 AQP3Q92482 292 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 FAM46BQ96A09 425 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 MRPS24Q96EL2 167 aaKnown RBP10.88□□□□□ -0.67
CLK3-214ENST00000564096 HMG20AQ9NP66 347 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 RABL2AQ9UBK7 228 aaPredicted RBP10.88□□□□□ -0.67
CLK3-214ENST00000564096 RAB22AQ9UL26 194 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 RABL2BQ9UNT1 228 aa10.88□□□□□ -0.67
CLK3-214ENST00000564096 A0A0A6YYH2 397 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 A6NJ64 397 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 LRRC30A6NM36 301 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 TMEM14DPA8MWL7 114 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 H3BUI4 141 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 IFNL4K9M1U5 179 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 CDIPTO14735 213 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 CDC14BO60729 498 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 HPGDSO60760 199 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 CTAG2O75638 210 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 HTR3BO95264 441 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 MPIG6BO95866 241 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 IRF2P14316 349 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 MGMTP16455 207 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 CPT2P23786 658 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 RAB12Q6IQ22 244 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 ASCL4Q6XD76 172 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 OR5H6Q8NGV6 325 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 SLAMF9Q96A28 289 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 S100A16Q96FQ6 103 aaKnown RBP10.87□□□□□ -0.67
CLK3-214ENST00000564096 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
CLK3-214ENST00000564096 RAB1BQ9H0U4 201 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 C1orf123Q9NWV4 160 aa10.87□□□□□ -0.67
CLK3-214ENST00000564096 ASH1LQ9NR48 2969 aaKnown RBP10.87□□□□□ -0.67
CLK3-214ENST00000564096 FAM221AA4D161 298 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 CTDSP2O14595 271 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 SYNGR1O43759 233 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 MST1LQ2TV78 715 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 SP5Q6BEB4 398 aaPredicted RBP10.86□□□□□ -0.67
CLK3-214ENST00000564096 ELP2Q6IA86 826 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 CRIP3Q6Q6R5 217 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 RNF144BQ7Z419 303 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 MOGAT3Q86VF5 341 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 C1orf87Q8N0U7 546 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 OSR2Q8N2R0 312 aa10.86□□□□□ -0.67
CLK3-214ENST00000564096 POC1AQ8NBT0 407 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms