RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 LCTP09848 1927 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 MED12Q93074 2177 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 MSGN1A6NI15 193 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 H3BQ15 152 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PLRG1O43660 514 aaKnown RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 P04436 131 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 SSTP61278 116 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 DLK1P80370 383 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-209ENST00000564068 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 OR13D1Q8NGV5 346 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 LMAN1LQ9HAT1 526 aa11.2□□□□□ -0.62
COMMD4-209ENST00000564068 SDK2Q58EX2 2172 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 TMEM265A0A087WTH1 108 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 LOC102725191A0A1B0GVB3 256 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 A8MXE2 369 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 TCAPO15273 167 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 TGOLN2O43493 480 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 WDR1O75083 606 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 CD38P28907 300 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 NOVA1P51513 510 aaKnown RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 LIMK1P53667 647 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 DRAM2Q6UX65 266 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 AAED1Q7RTV5 226 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 RDH5Q92781 318 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 C8orf33Q9H7E9 229 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 PLEKHF2Q9H8W4 249 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 FRG2CA6NGY1 282 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 HS3ST1O14792 307 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 EDN3P14138 238 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 CD200P41217 278 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 FHITP49789 147 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 ECH1Q13011 328 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 Q3ZCU0 254 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 WDR13Q9H1Z4 485 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 SLCO1B1Q9Y6L6 691 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 IGHV3-15A0A0B4J1V0 119 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 ERGP11308 486 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 SULT1A2P50226 295 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 ARTNQ5T4W7 220 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 DEGS2Q6QHC5 323 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 LYZL2Q7Z4W2 148 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 ZNF100Q8IYN0 542 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 EIF4E3Q8N5X7 224 aaKnown RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 FGF14Q92915 247 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 MRGPRX1Q96LB2 322 aa11.19□□□□□ -0.62
COMMD4-209ENST00000564068 RPP25Q9BUL9 199 aaKnown RBP11.19□□□□□ -0.62
COMMD4-209ENST00000564068 IGHV3-64DA0A0J9YX35 117 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 PLPP3O14495 311 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 GEMIN2O14893 280 aaKnown RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 HNF1AP20823 631 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 TNFRSF4P43489 277 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 OR1D5P58170 312 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 SLC25A26Q70HW3 274 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 SCN10AQ9Y5Y9 1956 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 MSX1P28360 303 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 CSNK1EP49674 416 aaKnown RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 FGF8P55075 233 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 INSM1Q01101 510 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 NHLH2Q02577 135 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 LTC4SQ16873 150 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 C8orf44Q96CB5 159 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 DHODHQ02127 395 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 SRPK3Q9UPE1 567 aa11.18□□□□□ -0.62
COMMD4-209ENST00000564068 TDRD15B5MCY1 1934 aaKnown RBP11.18□□□□□ -0.62
COMMD4-209ENST00000564068 TRBV5-7A0A0A0MS05 114 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 SYNGR4O95473 234 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 NRASP01111 189 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 CD8AP01732 235 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 IL2RGP31785 369 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 OR2I1PQ8NGU4 316 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 OR2AE1Q8NHA4 323 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 AICDAQ9GZX7 198 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 OR51I2Q9H344 312 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-209ENST00000564068 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 FTCDNL1E5RQL4 147 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 UBE2V2Q15819 145 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.17□□□□□ -0.62
COMMD4-209ENST00000564068 SLC26A1Q9H2B4 701 aa11.17□□□□□ -0.62
COMMD4-209ENST00000564068 TRGC2P03986 189 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms