RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CYB5AP00167 134 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 IGHV3-13P01766 116 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 RNASE12Q5GAN4 147 aaKnown RBP18.72■□□□□ 0.59
LINC01960-201ENST00000563759 RAB12Q6IQ22 244 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 HAGHLQ6PII5 290 aaPredicted RBP18.72■□□□□ 0.59
LINC01960-201ENST00000563759 CDH24Q86UP0 819 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 ZSCAN4Q8NAM6 433 aaPredicted RBP18.72■□□□□ 0.59
LINC01960-201ENST00000563759 NICN1Q9BSH3 213 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 LPAR5Q9H1C0 372 aa18.72■□□□□ 0.59
LINC01960-201ENST00000563759 TRAV18A0A075B6X5 111 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 IGKV1-12A0A0C4DH73 117 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.71■□□□□ 0.59
LINC01960-201ENST00000563759 PLSCR5A0PG75 271 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 H0YL77 283 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 IGKV1D-12P01611 117 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MNDAP41218 407 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 VEGFCP49767 419 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MOGAT2Q3SYC2 334 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 OR13G1Q8NGZ3 307 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 GCDHQ92947 438 aaPredicted RBP18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MRPL37Q9BZE1 423 aaKnown RBP18.71■□□□□ 0.59
LINC01960-201ENST00000563759 SELENOIQ9C0D9 397 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 ZNF462Q96JM2 2506 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 IGLV3-9A0A075B6K5 115 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 A0A1W2PQ09 198 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 CD3EP07766 207 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 INPP1P49441 399 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 RPS27AP62979 156 aaKnown RBP18.71■□□□□ 0.59
LINC01960-201ENST00000563759 ASCL4Q6XD76 172 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 Q6ZR03 302 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MKXQ8IYA7 352 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 SLAMF9Q96A28 289 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 MRPL24Q96A35 216 aaKnown RBP18.71■□□□□ 0.59
LINC01960-201ENST00000563759 PCDHB16Q9NRJ7 776 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 IL36GQ9NZH8 169 aa18.71■□□□□ 0.59
LINC01960-201ENST00000563759 LRP5LA4QPB2 252 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 CTDSPLO15194 276 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 C1QL1O75973 258 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 TPPPO94811 219 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 HLA-DQB1P01920 261 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 GTF2F2P13984 249 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 DGCR2P98153 550 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 SCN1BQ07699 218 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 RGS21Q2M5E4 152 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 BEX5Q5H9J7 111 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 OR51T1Q8NGJ9 327 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 ZNF442Q9H7R0 627 aa18.7■□□□□ 0.58
LINC01960-201ENST00000563759 NPDC1Q9NQX5 325 aaPredicted RBP18.7■□□□□ 0.58
LINC01960-201ENST00000563759 ISPDA4D126 451 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 RAB27BO00194 218 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 CPT2P23786 658 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 MRPS10P82664 201 aaKnown RBP18.69■□□□□ 0.58
LINC01960-201ENST00000563759 SAXO1Q8IYX7 474 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 CHST4Q8NCG5 386 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 C19orf18Q8NEA5 215 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 OR56B1Q8NGI3 324 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 SMIM4Q8WVI0 70 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 THAP7Q9BT49 309 aaPredicted RBP18.69■□□□□ 0.58
LINC01960-201ENST00000563759 OR51I2Q9H344 312 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 AUNIPQ9H7T9 357 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 TMEM210A6NLX4 147 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 F5H5P2 479 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 SFTPBP07988 381 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 PTHLHP12272 177 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 DEFA1P59665 94 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 DEFA3P59666 94 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 WDR86Q86TI4 376 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 BATF2Q8N1L9 274 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 SPERTQ8NA61 448 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 OR10R2Q8NGX6 335 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 CXXC4Q9H2H0 198 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 TAAR3PQ9P1P4 343 aa18.69■□□□□ 0.58
LINC01960-201ENST00000563759 MYO18BQ8IUG5 2567 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 PKDREJQ9NTG1 2253 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 TRAPPC2LH3BP13 241 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 J3QT63 122 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 SYNGR1O43759 233 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 CHRM2P08172 466 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 ZNF154Q13106 437 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 NKPD1Q17RQ9 610 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 TMEM200AQ86VY9 491 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 OSR2Q8N2R0 312 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 OR2Z1Q8NG97 314 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 PKIBQ9C010 78 aa18.68■□□□□ 0.58
LINC01960-201ENST00000563759 ZMAT3Q9HA38 289 aaKnown RBP18.68■□□□□ 0.58
LINC01960-201ENST00000563759 KMT2BQ9UMN6 2715 aaPredicted RBP18.68■□□□□ 0.58
LINC01960-201ENST00000563759 A0A0A6YYD4 124 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 IGHV3-64DA0A0J9YX35 117 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 LINC00854A0A1B0GVQ3 168 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 SHISA9B4DS77 424 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 GABARAPH6UMI1 98 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 GSTZ1O43708 216 aaPredicted RBP18.67■□□□□ 0.58
LINC01960-201ENST00000563759 GRPP07492 148 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 CD3GP09693 182 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 BCL3P20749 454 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 MZT1Q08AG7 82 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 IL24Q13007 206 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 DMRTC2Q8IXT2 367 aaPredicted RBP18.67■□□□□ 0.58
LINC01960-201ENST00000563759 POC5Q8NA72 575 aa18.67■□□□□ 0.58
LINC01960-201ENST00000563759 FCAMRQ8WWV6 532 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms