RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 IGKV1D-12P01611 117 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 TCRBP04435 133 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 GNB3P16520 340 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 TBPP20226 339 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 KITLGP21583 273 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 BLVRBP30043 206 aaPredicted RBP14.67□□□□□ -0.06
HDDC3-206ENST00000561036 CA7P43166 264 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 CBX5P45973 191 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 GPM6AP51674 278 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 GNG2P59768 71 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 PSG7Q13046 419 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 ZNF718Q3SXZ3 478 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 PLAC9Q5JTB6 97 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 MBNL2Q5VZF2 373 aaKnown RBP14.67□□□□□ -0.06
HDDC3-206ENST00000561036 ELP2Q6IA86 826 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 TRAPPC6BQ86SZ2 158 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 ZNF554Q86TJ5 538 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 OSR2Q8N2R0 312 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 KLF14Q8TD94 323 aaPredicted RBP14.67□□□□□ -0.06
HDDC3-206ENST00000561036 UPRTQ96BW1 309 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 CCDC120Q96HB5 630 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 NEURL2Q9BR09 285 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 RTL8AQ9BWD3 113 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 PKIBQ9C010 78 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 FGF23Q9GZV9 251 aaPredicted RBP14.67□□□□□ -0.06
HDDC3-206ENST00000561036 RHOFQ9HBH0 211 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 HSF4Q9ULV5 492 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 MEMO1Q9Y316 297 aa14.67□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A10PA6NDY2 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A18PA6NE21 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A16PA6NEW6 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A20PA6NIJ5 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A8PA6NJQ4 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A7PA6NKC0 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A22PA8MWA6 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A12PA8MX19 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A5PA8MXJ8 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A23PA8MXZ1 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 DHFRP00374 187 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A15PP0C7V4 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A13PP0C7W8 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A14PP0C7W9 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM90A24PP0C7X0 464 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 ZNF83P51522 516 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 FAM27E3Q08E93 113 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 STEAP1BQ6NZ63 245 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 SLC25A26Q70HW3 274 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 GLCCI1Q86VQ1 547 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 CALHM1Q8IU99 346 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 RELL2Q8NC24 303 aaPredicted RBP14.66□□□□□ -0.06
HDDC3-206ENST00000561036 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 ST8SIA4Q92187 359 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 ARHGAP5-AS1Q96IT6 56 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 PECRQ9BY49 303 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 ZMAT3Q9HA38 289 aaKnown RBP14.66□□□□□ -0.06
HDDC3-206ENST00000561036 SH3BGRL2Q9UJC5 107 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 PURGQ9UJV8 347 aaKnown RBP14.66□□□□□ -0.06
HDDC3-206ENST00000561036 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
HDDC3-206ENST00000561036 MED19A0JLT2 244 aaPredicted RBP14.65□□□□□ -0.06
HDDC3-206ENST00000561036 H3BUI4 141 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 TPD52L2O43399 206 aaKnown RBP14.65□□□□□ -0.06
HDDC3-206ENST00000561036 LILRA1O75019 489 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 PLATP00750 562 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 CRYAAP02489 173 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 CD74P04233 296 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 TRAPPC2P0DI81 140 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 TRAPPC2BP0DI82 140 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 NAT1P18440 290 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 CA6P23280 308 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 HLA-DMAP28067 261 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 GCH1P30793 250 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 CALCRP30988 508 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 HAAOP46952 286 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 ERVS71-1P61550 626 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 IL24Q13007 206 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 MEF2DQ14814 521 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 TMEM255AQ5JRV8 349 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 NHLRC3Q5JS37 347 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 LIX1LQ8IVB5 337 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 OR8G5Q8NG78 346 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 OR4C16Q8NGL9 310 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 OR8S1Q8NH09 359 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 OR56B4Q8NH76 319 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 OCSTAMPQ9BR26 566 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 IFT46Q9NQC8 304 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 KCNK7Q9Y2U2 307 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 DMXL2Q8TDJ6 3036 aa14.65□□□□□ -0.06
HDDC3-206ENST00000561036 IGF2RP11717 2491 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 TRGV8A0A0C4DH27 118 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.64□□□□□ -0.07
HDDC3-206ENST00000561036 LRP5LA4QPB2 252 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 MEIS3P1A6NDR6 274 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 TMEM210A6NLX4 147 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 ZNF736B4DX44 427 aaPredicted RBP14.64□□□□□ -0.07
HDDC3-206ENST00000561036 M0R1B8 84 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 ERVH48-1M5A8F1 160 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 SSX5O60225 188 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 H2AFB2P0C5Z0 115 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 PPP3CBP16298 524 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 MPZP25189 248 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms