RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PGLYRP3Q96LB9 341 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 PTTG3PQ9NZH4 202 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF69Q9UC07 566 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 DAPK2Q9UIK4 370 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 SIRT4Q9Y6E7 314 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-214ENST00000560402 RER1O15258 196 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 UPK1BO75841 260 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 RPP14O95059 124 aaKnown RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 RAB3BP20337 219 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 PTBP1P26599 531 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 TALDO1P37837 337 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 PSMB10P40306 273 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 CCR9P51686 369 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 GNB2P62879 340 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 IL13RA1P78552 427 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 ROM1Q03395 351 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 PAX8Q06710 450 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 BAMBIQ13145 260 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF684Q5T5D7 378 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 METAP1DQ6UB28 335 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 TMEM91Q6ZNR0 172 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 NLRC3Q7RTR2 1065 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 CCDC190Q86UF4 302 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 PARP16Q8N5Y8 322 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 CELF2-AS1Q8N7Q2 184 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 SLC26A10Q8NG04 563 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 OR2AJ1Q8NGZ0 328 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 RPS4Y2Q8TD47 263 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 SLC7A6Q92536 515 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 SLC25A28Q96A46 364 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 NEIL1Q96FI4 390 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 BARHL1Q9BZE3 327 aa11.36□□□□□ -0.59
SMAD3-214ENST00000560402 MS4A7Q9GZW8 240 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
SMAD3-214ENST00000560402 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 A0A1B0GWJ7 208 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 ANKRD61A6NGH8 418 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 APOA1P02647 267 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 DBHP09172 617 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 WNT2P09544 360 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 UCHL1P09936 223 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 TNFSF8P32971 234 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 GATA4P43694 442 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 PSMD7P51665 324 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 PAX2Q02962 417 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 OR2T2Q6IF00 324 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 COLCA1Q6ZS62 124 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-214ENST00000560402 OR8B3Q8NGG8 313 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 GPR148Q8TDV2 347 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 ERGIC1Q969X5 290 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 UPRTQ96BW1 309 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 DIRAS2Q96HU8 199 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 OR8B2Q96RD0 313 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 C1QTNF5Q9BXJ0 243 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 MEGF8Q7Z7M0 2845 aa11.35□□□□□ -0.59
SMAD3-214ENST00000560402 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 NOTOA8MTQ0 251 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 CTDSP2O14595 271 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 MLNRO43193 412 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 WIPF1O43516 503 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 SC5DO75845 299 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 PLATP00750 562 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 CD2P06729 351 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 H2BFMP0C1H6 154 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 CLEC2LP0C7M8 214 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 OCM2P0CE71 109 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 OCMP0CE72 109 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-214ENST00000560402 IRF2P14316 349 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 RANBP1P43487 201 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ECH1Q13011 328 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 HLXQ14774 488 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-214ENST00000560402 MEP1BQ16820 701 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 Q499Y3 187 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 IDNKQ5T6J7 187 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 FAM131AQ6UXB0 335 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 RAB40AQ8WXH6 277 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ABHD6Q9BV23 337 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 NIPAL2Q9H841 368 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 TMEM165Q9HC07 324 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 TCF7L1Q9HCS4 588 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ABCB9Q9NP78 766 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ABCB10Q9NRK6 738 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
SMAD3-214ENST00000560402 ABRACLQ9P1F3 81 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 COMMD3Q9UBI1 195 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 RABL2AQ9UBK7 228 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-214ENST00000560402 GTF2A1LQ9UNN4 478 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms