RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	NPTN	Q9Y639	398 aa		10.33	□□□□□ -0.76
USP8-209	ENST00000560297	PPIAL4E	A0A075B759	164 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	PPIAL4D	F5H284	164 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	PDCD5	O14737	125 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	CYB5R3	P00387	301 aa	Predicted RBP	10.32	□□□□□ -0.76
USP8-209	ENST00000560297	MAS1	P04201	325 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	PPIAL4F	P0DN26	164 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	GADD45A	P24522	165 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	MYL9	P24844	172 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	CALR	P27797	417 aa	Known RBP	10.32	□□□□□ -0.76
USP8-209	ENST00000560297	ZNF93	P35789	620 aa	Predicted RBP	10.32	□□□□□ -0.76
USP8-209	ENST00000560297	NR4A2	P43354	598 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	KCNJ8	Q15842	424 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	GLT8D1	Q68CQ7	371 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	C22orf42	Q6IC83	251 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	SLC25A26	Q70HW3	274 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	GPR141	Q7Z602	305 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	CALHM1	Q8IU99	346 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	TGIF2LY	Q8IUE0	185 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297		Q8IYB0	196 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	LRRC29	Q8WV35	223 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	UQCC2	Q9BRT2	126 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	OR51E2	Q9H255	320 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	RHOF	Q9HBH0	211 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	TXNL4B	Q9NX01	149 aa	Known RBP	10.32	□□□□□ -0.76
USP8-209	ENST00000560297	PPIAL4A	Q9Y536	164 aa		10.32	□□□□□ -0.76
USP8-209	ENST00000560297	ANKRD17	O75179	2603 aa	Known RBP	10.32	□□□□□ -0.76
USP8-209	ENST00000560297	TRAV38-1	A0A0B4J264	116 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	VWC2L	B2RUY7	222 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	SRRM5	B3KS81	715 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	NDUFA2	O43678	99 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	AIRE	O43918	545 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	RHBDL1	O75783	438 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	PGA5	P0DJD9	388 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	TMEM225B	P0DP42	221 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	CD37	P11049	281 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	PTGFR	P43088	359 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	POU3F4	P49335	361 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	BTG1	P62324	171 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	MICB	Q29980	383 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	LRRTM1	Q86UE6	522 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	TPRA1	Q86W33	373 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	LRRC28	Q86X40	367 aa	Predicted RBP	10.31	□□□□□ -0.76
USP8-209	ENST00000560297	KRTAP1-3	Q8IUG1	177 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	MUC20	Q8N307	709 aa	Predicted RBP	10.31	□□□□□ -0.76
USP8-209	ENST00000560297	GCSAM	Q8N6F7	178 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	POC1A	Q8NBT0	407 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	PXT1	Q8NFP0	134 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	OR51F2	Q8NH61	342 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	TMIGD2	Q96BF3	282 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297		Q96MF0	132 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	KCTD7	Q96MP8	289 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	SPACA5	Q96QH8	159 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	CHCHD6	Q9BRQ6	235 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	FUNDC2	Q9BWH2	189 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	BPESC1	Q9GZL8	116 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	METTL17	Q9H7H0	456 aa	Predicted RBP	10.31	□□□□□ -0.76
USP8-209	ENST00000560297	PCDHB16	Q9NRJ7	776 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	DCAF16	Q9NXF7	216 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	WIPI2	Q9Y4P8	454 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	PDZD2	O15018	2839 aa		10.31	□□□□□ -0.76
USP8-209	ENST00000560297	IGHV4-30-2	A0A087WSY4	118 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	LOC100506127	A0A0U1RQW1	187 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	TRAPPC2L	H3BP13	241 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	LGALS8	O00214	317 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	AKR7A2	O43488	359 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	SYNGR1	O43759	233 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	IGHV2-70	P01814	119 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	MUC1	P15941	1255 aa	Predicted RBP	10.3	□□□□□ -0.76
USP8-209	ENST00000560297	GLRA1	P23415	457 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	CPT2	P23786	658 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	MDH2	P40926	338 aa	Known RBP	10.3	□□□□□ -0.76
USP8-209	ENST00000560297	ZP1	P60852	638 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	ERVK11-1	P61568	191 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	TMEM155	Q4W5P6	130 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	CRIP3	Q6Q6R5	217 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	ASCL4	Q6XD76	172 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	FAM90A1	Q86YD7	464 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	ANKRD13B	Q86YJ7	626 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	JAGN1	Q8N5M9	183 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	BOLL	Q8N9W6	283 aa	Known RBP	10.3	□□□□□ -0.76
USP8-209	ENST00000560297	TNFAIP8L1	Q8WVP5	186 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	RFT1	Q96AA3	541 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	C12orf43	Q96C57	262 aa	Known RBP	10.3	□□□□□ -0.76
USP8-209	ENST00000560297	CEP19	Q96LK0	163 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	S100A13	Q99584	98 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	NRIP2	Q9BQI9	281 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	MTCH1	Q9NZJ7	389 aa		10.3	□□□□□ -0.76
USP8-209	ENST00000560297	PRRC2A	P48634	2157 aa	Known RBP	10.29	□□□□□ -0.76
USP8-209	ENST00000560297	CCDC168	Q8NDH2	2452 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	OOEP	A6NGQ2	149 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	SPRY1	O43609	319 aa	Predicted RBP	10.29	□□□□□ -0.76
USP8-209	ENST00000560297	ZNF780A	O75290	641 aa	Predicted RBP	10.29	□□□□□ -0.76
USP8-209	ENST00000560297	NXPH2	O95156	264 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	PLAT	P00750	562 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	HEXA	P06865	529 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	ADRA2C	P18825	462 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	USF1	P22415	310 aa	Predicted RBP	10.29	□□□□□ -0.76
USP8-209	ENST00000560297	MTNR1B	P49286	362 aa		10.29	□□□□□ -0.76
USP8-209	ENST00000560297	BMX	P51813	675 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms