RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 FGF23Q9GZV9 251 aaPredicted RBP7.44□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF556Q9HAH1 456 aa7.44□□□□□ -1.22
HDDC3-204ENST00000559834 ARL8BQ9NVJ2 186 aa7.44□□□□□ -1.22
HDDC3-204ENST00000559834 NECAP2Q9NVZ3 263 aa7.44□□□□□ -1.22
HDDC3-204ENST00000559834 ENPP5Q9UJA9 477 aa7.44□□□□□ -1.22
HDDC3-204ENST00000559834 POLDIP2Q9Y2S7 368 aa7.44□□□□□ -1.22
HDDC3-204ENST00000559834 TCRBV5S2A0A599 114 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ARRDC5A6NEK1 342 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ERICH4A6NGS2 130 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 FAM90A8PA6NJQ4 464 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 GNGT2O14610 69 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 NOS1APO75052 506 aaPredicted RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF254O75437 659 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 DCTN3O75935 186 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 CST1P01037 141 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 RAP2AP10114 183 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ATP6V1B2P21281 511 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 COX7A1P24310 79 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 BMXP51813 675 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 GYS2P54840 703 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ACTR3P61158 418 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 TRIM25Q14258 630 aaKnown RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 CNN3Q15417 329 aaKnown RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF684Q5T5D7 378 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 PLCXD3Q63HM9 321 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 LCN8Q6JVE9 175 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 CPOQ8IVL8 374 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 Q8N2B8 174 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 C11orf42Q8N5U0 333 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 CD177Q8N6Q3 437 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 OR4M1Q8NGD0 313 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 OR13D1Q8NGV5 346 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 PIFOQ8TCI5 191 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 FOXRED1Q96CU9 486 aaPredicted RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 LRGUKQ96M69 825 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 SERTAD4Q9NUC0 356 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 VNN3Q9NY84 501 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 TCF19Q9Y242 345 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 PIGLQ9Y2B2 252 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 ARL2BPQ9Y2Y0 163 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
HDDC3-204ENST00000559834 TMEM14AQ9Y6G1 99 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 NOTCH3Q9UM47 2321 aa7.43□□□□□ -1.22
HDDC3-204ENST00000559834 C17orf98A8MV24 154 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 B2RBV5 119 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 J3QT63 122 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 CHST1O43916 411 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 E2F6O75461 281 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 NXPH2O95156 264 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 TK1P04183 234 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ALDOBP05062 364 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ARG1P05089 322 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 PGA5P0DJD9 388 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 CD28P10747 220 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 OSMP13725 252 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 HOXB6P17509 224 aaKnown RBP7.42□□□□□ -1.22
HDDC3-204ENST00000559834 HAAOP46952 286 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 OR12D2P58182 307 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 CDK5Q00535 292 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF829Q3KNS6 432 aaPredicted RBP7.42□□□□□ -1.22
HDDC3-204ENST00000559834 TRPM8Q7Z2W7 1104 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF679Q8IYX0 411 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 LYG1Q8N1E2 194 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 OR51E1Q8TCB6 317 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ASB17Q8WXJ9 295 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 CHID1Q9BWS9 393 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 PBOV1Q9GZY1 135 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 MMP28Q9H239 520 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF702PQ9H963 129 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 GPR84Q9NQS5 396 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 FAM206AQ9NX38 181 aa7.42□□□□□ -1.22
HDDC3-204ENST00000559834 MEGF11A6BM72 1044 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 A6NDX4 124 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 K7N7A8 449 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 DLGAP1O14490 977 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 DHRS3O75911 302 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 RBP4P02753 201 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 CHRM2P08172 466 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 ANXA8P13928 327 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 CCL3L1P16619 93 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 PAX6P26367 422 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 RAB13P51153 203 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 RIDAP52758 137 aaKnown RBP7.41□□□□□ -1.22
HDDC3-204ENST00000559834 HCCSP53701 268 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 ESRRGP62508 458 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 MS4A2Q01362 244 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 ROM1Q03395 351 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 SSX2Q16385 188 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 DMRTC1Q5HYR2 192 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 CCBE1Q6UXH8 406 aaPredicted RBP7.41□□□□□ -1.22
HDDC3-204ENST00000559834 ZNF782Q6ZMW2 699 aaPredicted RBP7.41□□□□□ -1.22
HDDC3-204ENST00000559834 GDPD3Q7L5L3 318 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 WFDC9Q8NEX5 89 aa7.41□□□□□ -1.22
HDDC3-204ENST00000559834 NSL1Q96IY1 281 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms