RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SLC16A13Q7RTY0 426 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 C10orf107Q8IVU9 208 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 CD302Q8IX05 232 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 BOD1L2Q8IYS8 172 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ENTHD1Q8IYW4 607 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 DRAM1Q8N682 238 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF738Q8NE65 137 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 OR9A2Q8NGT5 310 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 OR6N1Q8NGY5 312 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 OR2L8Q8NGY9 312 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 OR13G1Q8NGZ3 307 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 SUN5Q8TC36 379 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 MRAP2Q96G30 205 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 MRPL48Q96GC5 212 aaKnown RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF414Q96IQ9 312 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 SMIM8Q96KF7 97 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 FOPNLQ96NB1 174 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF251Q9BRH9 671 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 DCUN1D5Q9BTE7 237 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 TBL1XR1Q9BZK7 514 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 NXF2Q9GZY0 626 aaKnown RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 HDHD2Q9H0R4 259 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ING2Q9H160 280 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 VCXQ9H320 206 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF355PQ9NSJ1 428 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 DDIT4Q9NX09 232 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 UBAP1Q9NZ09 502 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 MAT2BQ9NZL9 334 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNFX1Q9P2E3 1918 aaKnown RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 TBX21Q9UL17 535 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 RAB22AQ9UL26 194 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF608Q9ULD9 1512 aaPredicted RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 TFR2Q9UP52 801 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 NOSIPQ9Y314 301 aaKnown RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 ATP6V1DQ9Y5K8 247 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 FADS3Q9Y5Q0 445 aa1.53□□□□□ -2.16
GABPB1-209ENST00000559100 V9GYY5 206 aaPredicted RBP1.53□□□□□ -2.16
GABPB1-209ENST00000559100 GPATCH8Q9UKJ3 1502 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ELP1O95163 1332 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 IGLV3-16A0A075B6K0 115 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 A0A0U1RQV1 116 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RBFOX3A6NFN3 312 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 CENPBD1B2RD01 187 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 H0YJW9 148 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PANO1I0J062 215 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 M0QXV9 152 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 BPY2O14599 106 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RGS5O15539 181 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RBFOX2O43251 390 aaKnown RBP eCLIP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PLIN3O60664 434 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ENTPD6O75354 484 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 GCM2O75603 506 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ATP6V1G2O95670 118 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 HLA-DQA1P01909 254 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 HLA-DQB1P01920 261 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 C1GALT1C1LP0DN25 315 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 IL1RNP18510 177 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 TAC1P20366 129 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PSMB9P28065 219 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 SLC18A1P54219 525 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 AQP5P55064 265 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 UBE2G2P60604 165 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 BNIP2Q12982 314 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PTGES3Q15185 160 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 SHHQ15465 462 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ZNHIT3Q15649 155 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 TOMM34Q15785 309 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ATP6AP1LQ52LC2 224 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RBM48Q5RL73 367 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 LCE1FQ5T754 118 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ZFP2Q6ZN57 461 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 USP50Q70EL3 339 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 MRPL52Q86TS9 123 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PDPNQ86YL7 162 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 ZCCHC24Q8N2G6 241 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 LRRC52Q8N7C0 313 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 Q8N7P7 452 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 OR10G2Q8NGC3 310 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 OR2Y1Q8NGV0 311 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 OR5AK3PQ8NH89 298 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 OR2AE1Q8NHA4 323 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RNASEH2CQ8TDP1 164 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PHF10Q8WUB8 498 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 BLNKQ8WV28 456 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 OR5P2Q8WZ92 322 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PPWD1Q96BP3 646 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 L3HYPDHQ96EM0 354 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 NARS2Q96I59 477 aaKnown RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 MARVELD1Q9BSK0 173 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 SAMD10Q9BYL1 202 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 SLC17A9Q9BYT1 436 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 SHCBP1LQ9BZQ2 653 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RDH14Q9HBH5 336 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 FBXO6Q9NRD1 293 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 C8orf17Q9NRJ1 99 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 RBM22Q9NW64 420 aaKnown RBP eCLIP1.52□□□□□ -2.17
GABPB1-209ENST00000559100 TAS2R13Q9NYV9 303 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 PSMD13Q9UNM6 376 aa1.52□□□□□ -2.17
GABPB1-209ENST00000559100 USH1CQ9Y6N9 552 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms