RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CD99P14209 185 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 MAPK3P27361 379 aaPredicted RBP14.63□□□□□ -0.07
TPM1-214ENST00000558544 IL2RGP31785 369 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 MDH2P40926 338 aaKnown RBP14.63□□□□□ -0.07
TPM1-214ENST00000558544 MTCP1P56278 107 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 PPP3R1P63098 170 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 DEFB108BQ8NET1 73 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 THRSPQ92748 146 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 NEK6Q9HC98 313 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 CKLFQ9UBR5 152 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 DOCK11Q5JSL3 2073 aa14.63□□□□□ -0.07
TPM1-214ENST00000558544 TRAV8-7A0A075B6U6 113 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 IGHV3OR15-7A0A075B7D8 119 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 PIN1P1O15428 100 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 SC5DO75845 299 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 RGS9O75916 674 aaPredicted RBP14.62□□□□□ -0.07
TPM1-214ENST00000558544 IGFBP3P17936 291 aaPredicted RBP14.62□□□□□ -0.07
TPM1-214ENST00000558544 FSTP19883 344 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 MPZP25189 248 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 GABRA5P31644 462 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 CFHR2P36980 270 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 TGFBR2P37173 567 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 ALDH3B2P48448 385 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 POU3F4P49335 361 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 TRAM1Q15629 374 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 FAM27D1Q5T7N8 215 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 UNQ9370/PRO34162Q6UXP9 181 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 CEACAM19Q7Z692 300 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 LRRC28Q86X40 367 aaPredicted RBP14.62□□□□□ -0.07
TPM1-214ENST00000558544 BATF2Q8N1L9 274 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 MUC20Q8N307 709 aaPredicted RBP14.62□□□□□ -0.07
TPM1-214ENST00000558544 ZNF671Q8TAW3 534 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 SEH1LQ96EE3 360 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 C18orf12Q96KH6 178 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 ZNF488Q96MN9 340 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 PKIBQ9C010 78 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 WDR13Q9H1Z4 485 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 TMEM165Q9HC07 324 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 NDUFB11Q9NX14 153 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 POLDIP2Q9Y2S7 368 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 F8P00451 2351 aa14.62□□□□□ -0.07
TPM1-214ENST00000558544 OOEPA6NGQ2 149 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.61□□□□□ -0.07
TPM1-214ENST00000558544 LGALS8O00214 317 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 CCRL2O00421 344 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 MAGEB3O15480 346 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 GLRA1P23415 457 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 PSMA1P25786 263 aaKnown RBP14.61□□□□□ -0.07
TPM1-214ENST00000558544 FABP5Q01469 135 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 ZNF404Q494X3 552 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 TMEM155Q4W5P6 130 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 CRIP3Q6Q6R5 217 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 TMEM91Q6ZNR0 172 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 SPICQ8N5J4 248 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 OR52N4Q8NGI2 321 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 OR5D18Q8NGL1 313 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 MUL1Q969V5 352 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 NKX3-1Q99801 234 aaPredicted RBP14.61□□□□□ -0.07
TPM1-214ENST00000558544 TMEM246Q9BRR3 403 aa14.61□□□□□ -0.07
TPM1-214ENST00000558544 CEACAM18A8MTB9 384 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 GABRPO00591 440 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 SPRY1O43609 319 aaPredicted RBP14.6□□□□□ -0.07
TPM1-214ENST00000558544 GPX5O75715 221 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 IGHV2-5P01817 119 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 MAS1P04201 325 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 INHBBP09529 407 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 PGA5P0DJD9 388 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 BDKRB2P30411 391 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 RPL5P46777 297 aaKnown RBP14.6□□□□□ -0.07
TPM1-214ENST00000558544 GP2P55259 537 aaKnown RBP14.6□□□□□ -0.07
TPM1-214ENST00000558544 IL24Q13007 206 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 KISS1Q15726 138 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 TMEM249Q2WGJ8 235 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 SYT6Q5T7P8 510 aaPredicted RBP14.6□□□□□ -0.07
TPM1-214ENST00000558544 DDI2Q5TDH0 399 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 TEX36Q5VZQ5 186 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 SLC25A26Q70HW3 274 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 SATL1Q86VE3 508 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 FAM90A1Q86YD7 464 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 POC1AQ8NBT0 407 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 SLAMF9Q96A28 289 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 ZNF665Q9H7R5 613 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 VCX3AQ9NNX9 186 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 TMEM138Q9NPI0 162 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 FOXJ3Q9UPW0 622 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 TRAV38-1A0A0B4J264 116 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 FSTL3O95633 263 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 GYPAP02724 150 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 LMO4P61968 165 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 HSD17B12Q53GQ0 312 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 GPER1Q99527 375 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 PPIL3Q9H2H8 161 aaKnown RBP14.6□□□□□ -0.07
TPM1-214ENST00000558544 SNTG1Q9NSN8 517 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 MTCH1Q9NZJ7 389 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 DNAJB11Q9UBS4 358 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 PCDHB10Q9UN67 800 aa14.6□□□□□ -0.07
TPM1-214ENST00000558544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.59□□□□□ -0.075e-6■■■□□ 16.3
TPM1-214ENST00000558544 ANGPTL7O43827 346 aa14.59□□□□□ -0.07
TPM1-214ENST00000558544 NOS1APO75052 506 aaPredicted RBP14.59□□□□□ -0.07
TPM1-214ENST00000558544 CYB5AP00167 134 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms