RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 POU3F4P49335 361 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 OR10A3P58181 314 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 MRPS11P82912 194 aaKnown RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 ZNF181Q2M3W8 571 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 HES5Q5TA89 166 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 RAB12Q6IQ22 244 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 Q6ZR03 302 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 OR51F2Q8NH61 342 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 NRGNQ92686 78 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 MEGF10Q96KG7 1140 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 OR2V2Q96R30 315 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 TRAF4Q9BUZ4 470 aaPredicted RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 SLIRPQ9GZT3 109 aaKnown RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 C6orf62Q9GZU0 229 aaPredicted RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 SAP30LQ9HAJ7 183 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 SMURF1Q9HCE7 757 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 MYEF2Q9P2K5 600 aaKnown RBP10.54□□□□□ -0.72
TPM1-209ENST00000558072 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
TPM1-209ENST00000558072 ZSCAN5BA6NJL1 495 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 F5H5P2 479 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 H7C417 338 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 RGS5O15539 181 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 LILRA1O75019 489 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 NCR1O76036 304 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 APOA1P02647 267 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 GRPP07492 148 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 CHRM2P08172 466 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 DANCRP0C864 163 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 ART1P52961 327 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 KRTAP10-9P60411 292 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 ZP1P60852 638 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 ZNF154Q13106 437 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 MST1LQ2TV78 715 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 ELP2Q6IA86 826 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 BAIAP2L2Q6UXY1 529 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 SLC25A26Q70HW3 274 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 LRRC28Q86X40 367 aaPredicted RBP10.53□□□□□ -0.72
TPM1-209ENST00000558072 FAM90A1Q86YD7 464 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 OR10AD1Q8NGE0 317 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 Q8TCH9 128 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 AQP3Q92482 292 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
TPM1-209ENST00000558072 S100A16Q96FQ6 103 aaKnown RBP10.53□□□□□ -0.72
TPM1-209ENST00000558072 GFI1Q99684 422 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 BARHL1Q9BZE3 327 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 MYOZ1Q9NP98 299 aaPredicted RBP10.53□□□□□ -0.72
TPM1-209ENST00000558072 DIABLOQ9NR28 239 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 DLL4Q9NR61 685 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 NPTNQ9Y639 398 aa10.53□□□□□ -0.72
TPM1-209ENST00000558072 ADGRG4Q8IZF6 3080 aa10.52□□□□□ -0.72
TPM1-209ENST00000558072 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 AKR7A2O43488 359 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 CPT2P23786 658 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 MAB21L1Q13394 359 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 UBE2NLQ5JXB2 153 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 METAP1DQ6UB28 335 aaPredicted RBP10.52□□□□□ -0.73
TPM1-209ENST00000558072 SCCPDHQ8NBX0 429 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 Q8NFD4 153 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 OR4D6Q8NGJ1 314 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 S100ZQ8WXG8 99 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 SLC25A28Q96A46 364 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 SPACA5Q96QH8 159 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 VRK1Q99986 396 aaPredicted RBP10.52□□□□□ -0.73
TPM1-209ENST00000558072 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 SPACA1Q9HBV2 294 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 RNF7Q9UBF6 113 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 COMMD3Q9UBI1 195 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 ABCA4P78363 2273 aa10.52□□□□□ -0.73
TPM1-209ENST00000558072 HELZ2Q9BYK8 2649 aaKnown RBP10.52□□□□□ -0.73
TPM1-209ENST00000558072 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
TPM1-209ENST00000558072 IGKV1-27A0A075B6S5 117 aa10.51□□□□□ -0.73
TPM1-209ENST00000558072 hCG_1807616A0A1W2PRN6 198 aa10.51□□□□□ -0.73
TPM1-209ENST00000558072 H0YL77 283 aa10.51□□□□□ -0.73
TPM1-209ENST00000558072 CDIPTO14735 213 aa10.51□□□□□ -0.73
TPM1-209ENST00000558072 PTBP1P26599 531 aaKnown RBP eCLIP10.51□□□□□ -0.732e-8■■□□□ 11.5
TPM1-209ENST00000558072 RBMXP38159 391 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms