RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMEM200AQ86VY9 491 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 LAX1Q8IWV1 398 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 RAB40AQ8WXH6 277 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 MEGF10Q96KG7 1140 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 WDFY2Q96P53 400 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 OR2V2Q96R30 315 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 TLNRD1Q9H1K6 362 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 CBLN4Q9NTU7 201 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 IL36GQ9NZH8 169 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 RAB22AQ9UL26 194 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 CHD6Q8TD26 2715 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 FAM221AA4D161 298 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 A6NLC8 198 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 TMEM14DPA8MWL7 114 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 TRAPPC2LH3BP13 241 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 LDLRAD4O15165 306 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 ANGPTL7O43827 346 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 CRTAPO75718 401 aaPredicted RBP14.31□□□□□ -0.12
SNX1-203ENST00000558040 KDM4BO94953 1096 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 PTBP3O95758 552 aaKnown RBP14.31□□□□□ -0.12
SNX1-203ENST00000558040 VSIG8P0DPA2 414 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 TALDO1P37837 337 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 PPOXP50336 477 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 TLE4Q04727 773 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 CDH24Q86UP0 819 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 SCCPDHQ8NBX0 429 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 AQP3Q92482 292 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 C1orf147Q96MC9 270 aaPredicted RBP14.31□□□□□ -0.12
SNX1-203ENST00000558040 EGLN1Q9GZT9 426 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 ABCG5Q9H222 651 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 MIXL1Q9H2W2 232 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 FN3KRPQ9HA64 309 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 RHBDL2Q9NX52 303 aa14.31□□□□□ -0.12
SNX1-203ENST00000558040 METTL21EPA6NDL7 271 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 TPD52L2O43399 206 aaKnown RBP14.3□□□□□ -0.12
SNX1-203ENST00000558040 HTR3BO95264 441 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 TNFRSF1AP19438 455 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 SERPINA2P20848 420 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 TNFSF8P32971 234 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 GATA4P43694 442 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 QRFPP83859 136 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 TESK1Q15569 626 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 PRAMEF6Q5VXH4 476 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 DTX2Q86UW9 622 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 Q8IYB0 196 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 ITLN1Q8WWA0 313 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 ERGIC1Q969X5 290 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 SLAMF9Q96A28 289 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 PHF21AQ96BD5 680 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 SLC25A38Q96DW6 304 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 MRPS24Q96EL2 167 aaKnown RBP14.3□□□□□ -0.12
SNX1-203ENST00000558040 S100A16Q96FQ6 103 aaKnown RBP14.3□□□□□ -0.12
SNX1-203ENST00000558040 DIRAS2Q96HU8 199 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 URM1Q9BTM9 101 aaKnown RBP14.3□□□□□ -0.12
SNX1-203ENST00000558040 TMEM59Q9BXS4 323 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 KCNK15Q9H427 330 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 UBTD1Q9HAC8 227 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 DECR2Q9NUI1 292 aa14.3□□□□□ -0.12
SNX1-203ENST00000558040 PLCE1Q9P212 2302 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 IGKV1-12A0A0C4DH73 117 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 CDIPTO14735 213 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 SYNGR1O43759 233 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 CDC14BO60729 498 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 CTAG2O75638 210 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 SCGNO76038 276 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 MPIG6BO95866 241 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 IGKV1D-12P01611 117 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 EIF4EP06730 217 aaKnown RBP14.29□□□□□ -0.12
SNX1-203ENST00000558040 GTF2F2P13984 249 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 ELK1P19419 428 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 OR10K2Q6IF99 312 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 OR10K1Q8NGX5 313 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 FAM46BQ96A09 425 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 HMG20AQ9NP66 347 aa14.29□□□□□ -0.12
SNX1-203ENST00000558040 UBR5O95071 2799 aaPredicted RBP14.29□□□□□ -0.12
SNX1-203ENST00000558040 IGHV3-64DA0A0J9YX35 117 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 A0A1W2PPR1 153 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 hCG_1807616A0A1W2PRN6 198 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 ACAA1P09110 424 aaPredicted RBP14.28□□□□□ -0.12
SNX1-203ENST00000558040 DANCRP0C864 163 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 MGMTP16455 207 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 UNC119Q13432 240 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 ELP2Q6IA86 826 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 CNIH2Q6PI25 160 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 BAIAP2L2Q6UXY1 529 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 CCDC190Q86UF4 302 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 OSR2Q8N2R0 312 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 OR11L1Q8NGX0 322 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 ATG5Q9H1Y0 275 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 CLEC4MQ9H2X3 399 aaPredicted RBP14.28□□□□□ -0.12
SNX1-203ENST00000558040 BANF2Q9H503 90 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 SAP30LQ9HAJ7 183 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 DIABLOQ9NR28 239 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 UFSP2Q9NUQ7 469 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 C1orf123Q9NWV4 160 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms