RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ERGIC3Q9Y282 383 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 LRCH1Q9Y2L9 728 aa13.86□□□□□ -0.19
NEK9-211ENST00000557673 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 SIRT4Q9Y6E7 314 aaPredicted RBP13.86□□□□□ -0.19
NEK9-211ENST00000557673 TRBV2A0A0J9YWF9 115 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 ANXA2P2A6NMY6 339 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 ZNF850A8MQ14 1090 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 PMELP40967 661 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 TAS2R43P59537 309 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 PAX8Q06710 450 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 SLC9A3R2Q15599 337 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 MIDNQ504T8 468 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 PRAMEF6Q5VXH4 476 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 C9orf139Q6ZV77 190 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 WDR86Q86TI4 376 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 OR51A4Q8NGJ6 313 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 OR5AK2Q8NH90 309 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 PIGCQ92535 297 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 RGP1Q92546 391 aaPredicted RBP13.85□□□□□ -0.19
NEK9-211ENST00000557673 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
NEK9-211ENST00000557673 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 HHLA2Q9UM44 414 aa13.85□□□□□ -0.19
NEK9-211ENST00000557673 CEACAM18A8MTB9 384 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 F5H0A9 414 aaPredicted RBP13.84□□□□□ -0.19
NEK9-211ENST00000557673 OGG1O15527 345 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 MZT1Q08AG7 82 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 TBCEQ15813 527 aaPredicted RBP13.84□□□□□ -0.19
NEK9-211ENST00000557673 FAM201AQ5SY85 155 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 CLVS2Q5SYC1 327 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 PLCXD3Q63HM9 321 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 DMKNQ6E0U4 476 aaPredicted RBP13.84□□□□□ -0.19
NEK9-211ENST00000557673 ZFP41Q8N8Y5 198 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 Q8TCH9 128 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 OR5P3Q8WZ94 311 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 C10orf35Q96D05 121 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 RTL8AQ9BWD3 113 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 CHST5Q9GZS9 411 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 C14orf119Q9NWQ9 140 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 MMP24Q9Y5R2 645 aa13.84□□□□□ -0.19
NEK9-211ENST00000557673 A6NIN4 97 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 RPSAP08865 295 aaKnown RBP13.83□□□□□ -0.2
NEK9-211ENST00000557673 EEF1B2P24534 225 aaKnown RBP13.83□□□□□ -0.2
NEK9-211ENST00000557673 CD80P33681 288 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 BDH1Q02338 343 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 ACSM1Q08AH1 577 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 MPPED2Q15777 294 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 ZNF181Q2M3W8 571 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 CEP78Q5JTW2 689 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 OR13C3Q8NGS6 347 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 ERGIC1Q969X5 290 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 TMIGD2Q96BF3 282 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 ADAT3Q96EY9 351 aaPredicted RBP13.83□□□□□ -0.2
NEK9-211ENST00000557673 PGLYRP3Q96LB9 341 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 OR5M11Q96RB7 305 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 MICU1Q9BPX6 476 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 SSBP3Q9BWW4 388 aaPredicted RBP13.83□□□□□ -0.2
NEK9-211ENST00000557673 CCDC90BQ9GZT6 254 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 TLNRD1Q9H1K6 362 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 TMEM165Q9HC07 324 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 UFSP2Q9NUQ7 469 aa13.83□□□□□ -0.2
NEK9-211ENST00000557673 A0A0G2JK05 382 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 ANKRD61A6NGH8 418 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 OR5B21A6NL26 309 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 TMEM210A6NLX4 147 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 LRRC30A6NM36 301 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 NRASP01111 189 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 HOXA4Q00056 320 aaPredicted RBP13.82□□□□□ -0.2
NEK9-211ENST00000557673 SPHARQ15513 63 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 CEACAM21Q3KPI0 293 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 OR1M1Q8NGA1 313 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 PP6455Q8WZ26 134 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 UPRTQ96BW1 309 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 YTHDF1Q9BYJ9 559 aaKnown RBP13.82□□□□□ -0.2
NEK9-211ENST00000557673 FN3KRPQ9HA64 309 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 GPR173Q9NS66 373 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 MIOXQ9UGB7 285 aa13.82□□□□□ -0.2
NEK9-211ENST00000557673 PNMA8CA0A1B0GUJ8 204 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 MRPS14O60783 128 aaKnown RBP13.81□□□□□ -0.2
NEK9-211ENST00000557673 GATBO75879 557 aaKnown RBP13.81□□□□□ -0.2
NEK9-211ENST00000557673 KNG1P01042 644 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 CRYBA1P05813 215 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 WNT2P09544 360 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 IRF2P14316 349 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 RPS2P15880 293 aaKnown RBP13.81□□□□□ -0.2
NEK9-211ENST00000557673 ZNF20P17024 532 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 MDKP21741 143 aaPredicted RBP13.81□□□□□ -0.2
NEK9-211ENST00000557673 GPM6AP51674 278 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 BPIFB3P59826 476 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 GNB2P62879 340 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 GNG3P63215 75 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 DMRTC1Q5HYR2 192 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 C17orf107Q6ZR85 190 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 C1orf87Q8N0U7 546 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 C19orf18Q8NEA5 215 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 OR11L1Q8NGX0 322 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 GPR148Q8TDV2 347 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 TSEN15Q8WW01 171 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms