RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DDIT4Q9NX09 232 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 USE1Q9NZ43 259 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 KIF25Q9UIL4 384 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RAB26Q9ULW5 256 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 UBQLN1Q9UMX0 589 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SIGLEC9Q9Y336 463 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PEX16Q9Y5Y5 336 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 UBIAD1Q9Y5Z9 338 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 KPTNQ9Y664 436 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 U3KQ87 197 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GLI3P10071 1580 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SYCP2Q9BX26 1530 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CUL7Q14999 1698 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CHD2O14647 1828 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 MYH1P12882 1939 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RAI1Q7Z5J4 1906 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 MYO3AQ8NEV4 1616 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 IGHV2-70DA0A0C4DH43 119 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ISPDA4D126 451 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR5H14A6NHG9 310 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 FAM74A7A6NL05 159 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 C11orf98E9PRG8 122 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 GFYI3L273 518 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 MFSD11O43934 449 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 FKBP6O75344 327 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF253O75346 499 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 AP2A1O95782 977 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A27O95847 323 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 HPRT1P00492 218 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 IFNA17P01571 189 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 THY1P04216 161 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR13C7P0DN81 318 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 MMP11P24347 488 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 CD82P27701 267 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SDC4P31431 198 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 BRS3P32247 399 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 CHI3L1P36222 383 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 PLP1P60201 277 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 KRTAP10-5P60370 271 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 RRAS2P62070 204 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 RUNX1Q01196 453 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 AESQ08117 197 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 EIF2B1Q14232 305 aaKnown RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 IHHQ14623 411 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR1Q1Q15612 314 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ATP6V1FQ16864 119 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF181Q2M3W8 571 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 VPS26BQ4G0F5 336 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 FAM74A3Q4VXF1 159 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 PYCR3Q53H96 274 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A30Q5SVS4 291 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM78Q5T7P6 136 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM107Q6UX40 140 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 APOOLQ6UXV4 268 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ADAMTSL5Q6ZMM2 481 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM179Q6ZVK1 233 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 FAM220AQ7Z4H9 259 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 C9orf40Q8IXQ3 194 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 CPNE9Q8IYJ1 553 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 H1FOOQ8IZA3 346 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 CMTM8Q8IZV2 173 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 Q8N402 240 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SUMF1Q8NBK3 374 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 FBXO36Q8NEA4 188 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR4F15Q8NGB8 312 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR10A6Q8NH74 314 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 OR5AK3PQ8NH89 298 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 STOML3Q8TAV4 291 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ORAOV1Q8WV07 137 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ASB17Q8WXJ9 295 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 HIST1H2BAQ96A08 127 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 CLDN23Q96B33 292 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 UPRTQ96BW1 309 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ISOC1Q96CN7 298 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 MALSU1Q96EH3 234 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 PPP1R16AQ96I34 528 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 YPEL4Q96NS1 127 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF382Q96SR6 550 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SOSTQ9BQB4 213 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 NIPSNAP3BQ9BS92 247 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ULBP2Q9BZM5 246 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ARV1Q9H2C2 271 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 PPDPFQ9H3Y8 114 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 UBE2ZQ9H832 354 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ADGRL4Q9HBW9 690 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 DYRK4Q9NR20 520 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 DUS2Q9NX74 493 aaKnown RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 DKKL1Q9UK85 242 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SNX12Q9UMY4 172 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 TFR2Q9UP52 801 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 SCN4AP35499 1836 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 MYH2Q9UKX2 1941 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 ADAMTSL1Q8N6G6 1762 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 KIAA0556O60303 1618 aa1.28□□□□□ -2.21
HIF1A-212ENST00000557538 AHDC1Q5TGY3 1603 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-212ENST00000557538 IGSF9BQ9UPX0 1349 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 NWD1Q149M9 1564 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 DIP2CQ9Y2E4 1556 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ABCC5O15440 1437 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ADAMTS9Q9P2N4 1935 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms