RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PIGYQ3MUY2 71 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 EMG1Q92979 244 aaKnown RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 MRPL24Q96A35 216 aaKnown RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 F8W036 122 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 LRP3O75074 770 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 CSTBP04080 98 aaKnown RBP15.43■□□□□ 0.06
XRCC3-218ENST00000557439 LCATP04180 440 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 BLOC1S1P78537 153 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 RPUSD3Q6P087 351 aaKnown RBP15.43■□□□□ 0.06
XRCC3-218ENST00000557439 SLC16A14Q7RTX9 510 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 C5orf24Q7Z6I8 188 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 RNF141Q8WVD5 230 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 PP6455Q8WZ26 134 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 MARS2Q96GW9 593 aaKnown RBP15.43■□□□□ 0.06
XRCC3-218ENST00000557439 REEP6Q96HR9 211 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 Q96M66 194 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 SLC5A7Q9GZV3 580 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 PLA2G2EQ9NZK7 142 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 AK3Q9UIJ7 227 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 PILRBQ9UKJ0 227 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 SGCEO43556 437 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF708P17019 499 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 FXYD4P59646 89 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 HIST1H3AP68431 136 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 IL15RAQ13261 267 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 HIST2H3PS2Q5TEC6 136 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 HIST2H3AQ71DI3 136 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 CLRN3Q8NCR9 226 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 TM2D1Q9BX74 207 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 TMEM100Q9NV29 134 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 C14orf166Q9Y224 244 aaKnown RBP15.43■□□□□ 0.06
XRCC3-218ENST00000557439 LSM5Q9Y4Y9 91 aaKnown RBP15.43■□□□□ 0.06
XRCC3-218ENST00000557439 ZDBF2Q9HCK1 2354 aa15.43■□□□□ 0.06
XRCC3-218ENST00000557439 NSG1A0A0A6YYJ2 146 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF32P17041 273 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 ALDH3B1P43353 468 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 CCDC36Q8IYA8 594 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SULT4A1Q9BR01 284 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SERPINE3A8MV23 424 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 EIF1BO60739 113 aaKnown RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 IFNA2P01563 188 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 RBMXP38159 391 aaKnown RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 NOVA1P51513 510 aaKnown RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF84P51523 738 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SUCLG1P53597 346 aaKnown RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 RSU1Q15404 277 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 PMS2CLQ68D20 193 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SULF2Q8IWU5 870 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 ARL11Q969Q4 196 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SPTSSAQ969W0 71 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 BSCL2Q96G97 398 aaPredicted RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF700Q9H0M5 742 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 SMOC1Q9H4F8 434 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 WDR54Q9H977 334 aa15.42■□□□□ 0.06
XRCC3-218ENST00000557439 NXT1Q9UKK6 140 aaKnown RBP15.42■□□□□ 0.06
XRCC3-218ENST00000557439 A0A087WZY1 265 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 IGKV1-12A0A0C4DH73 117 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 RAB19A4D1S5 217 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 GEMIN2O14893 280 aaKnown RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 CXCL13O43927 109 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 FARS2O95363 451 aaKnown RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 IGKV1D-12P01611 117 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 SPINK2P20155 84 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 LPAR6P43657 344 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 NPBWR1P48145 328 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 FOXL2NBQ6ZUU3 175 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 AGBL5Q8NDL9 886 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 OR14L1PQ8NHC6 308 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 SCGB3A2Q96PL1 93 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 AQP10Q96PS8 301 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 NAA11Q9BSU3 229 aaPredicted RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF629Q9UEG4 869 aaPredicted RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 AHCTF1Q8WYP5 2266 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 MTRF1O75570 445 aaKnown RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 OR5H8P0DN80 308 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 HKR1P10072 659 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 CRYGSP22914 178 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 PHLDA2Q53GA4 152 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 H3F3CQ6NXT2 135 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 PRDM6Q9NQX0 595 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 GHRLQ9UBU3 117 aa15.41■□□□□ 0.06
XRCC3-218ENST00000557439 URB1O60287 2271 aaKnown RBP15.41■□□□□ 0.06
XRCC3-218ENST00000557439 ZNF850A8MQ14 1090 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 SYNGR3O43761 229 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 LYL1P12980 280 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 OTX2P32243 289 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 RGS19P49795 217 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 RAC1P63000 192 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 CCDC157Q569K6 752 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 WIPI1Q5MNZ9 446 aaPredicted RBP15.4■□□□□ 0.06
XRCC3-218ENST00000557439 FAM27BQ5VT28 67 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 SLC23A3Q6PIS1 610 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 RHBDD1Q8TEB9 315 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 NAT6Q93015 286 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 SH2D2AQ9NP31 389 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 PCDHB16Q9NRJ7 776 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 ANXA10Q9UJ72 324 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 C9J4A7 227 aa15.4■□□□□ 0.06
XRCC3-218ENST00000557439 TRAPPC6AO75865 159 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms