RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FXYD4P59646 89 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 GUK1Q16774 197 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 C20orf196Q8IYI0 205 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 FAM24BQ8N5W8 94 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 TSTD1Q8NFU3 115 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 DYRK2Q92630 601 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 EGLN1Q9GZT9 426 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 TUBD1Q9UJT1 453 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 KPTNQ9Y664 436 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 EML6Q6ZMW3 1958 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 FAM221AA4D161 298 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 CRYM-AS1A6NIL9 109 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 SERPINE3A8MV23 424 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 MASP2O00187 686 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 SPRY1O43609 319 aaPredicted RBP9.96□□□□□ -0.81
SRP54-213ENST00000556994 OR2J2O76002 312 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 FABP1P07148 127 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 PRF1P14222 555 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 ZNF14P17017 642 aaPredicted RBP9.96□□□□□ -0.81
SRP54-213ENST00000556994 ACKR3P25106 362 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 CD27P26842 260 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 PTGDSP41222 190 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 ZNF84P51523 738 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 SUMO3P55854 103 aaPredicted RBP9.96□□□□□ -0.81
SRP54-213ENST00000556994 PIGPP57054 158 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 OR2B8PP59922 312 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 HNRNPKP61978 463 aaKnown RBP eCLIP9.96□□□□□ -0.81
SRP54-213ENST00000556994 FAM3AP98173 230 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 FAM189A2Q15884 450 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 TAF9Q16594 264 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 PHYHD1Q5SRE7 291 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 ADAM5Q6NVV9 412 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 OGFOD3Q6PK18 319 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 OPN5Q6U736 354 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 LYZL2Q7Z4W2 148 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 OR6X1Q8NH79 312 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 PIGQQ9BRB3 760 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 GSN-AS1Q9NRJ2 163 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 FAM212BQ9NTI7 297 aaPredicted RBP9.96□□□□□ -0.81
SRP54-213ENST00000556994 PISDQ9UG56 409 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.81
SRP54-213ENST00000556994 STARD10Q9Y365 291 aa9.96□□□□□ -0.81
SRP54-213ENST00000556994 IGHV3-15A0A0B4J1V0 119 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 ZNF850A8MQ14 1090 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 UBE2CO00762 179 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 DUX1O43812 170 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 TIAF1O95411 115 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 GAPDHP04406 335 aaKnown RBP9.96□□□□□ -0.82
SRP54-213ENST00000556994 S100A9P06702 114 aaKnown RBP9.96□□□□□ -0.82
SRP54-213ENST00000556994 OR5AC1P0C628 307 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 OR5H8P0DN80 308 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 LTBRP36941 435 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 CAMLGP49069 296 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 NOVA1P51513 510 aaKnown RBP9.96□□□□□ -0.82
SRP54-213ENST00000556994 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.82
SRP54-213ENST00000556994 PHLDA2Q53GA4 152 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 PRAMEF20Q5VT98 475 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 RPUSD3Q6P087 351 aaKnown RBP9.96□□□□□ -0.82
SRP54-213ENST00000556994 ZNF561Q8N587 486 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 TMEM156Q8N614 296 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 UBAC2Q8NBM4 344 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 OXGR1Q96P68 337 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 GPR173Q9NS66 373 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 FBXO7Q9Y3I1 522 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 VPS13AQ96RL7 3174 aa9.96□□□□□ -0.82
SRP54-213ENST00000556994 FREM2Q5SZK8 3169 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 TRAV20A0A0B4J274 112 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 A0A1W2PPE2 198 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 TXNL1O43396 289 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 PRH1P02810 166 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 MT-ND4LP03901 98 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
SRP54-213ENST00000556994 OR13C7P0DN81 318 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 NQO2P16083 231 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 GRB2P62993 217 aaKnown RBP9.95□□□□□ -0.82
SRP54-213ENST00000556994 NHLH2Q02577 135 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 RSPO1Q2MKA7 263 aaPredicted RBP9.95□□□□□ -0.82
SRP54-213ENST00000556994 PLXDC2Q6UX71 529 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 OR52M1Q8NGK5 317 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 ANXA10Q9UJ72 324 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 UMAD1C9J7I0 102 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 DHRS3O75911 302 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 DANCRP0C864 163 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 AGAP20933 346 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 PDCD1Q15116 288 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 HIST3H3Q16695 136 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 OR2AE1Q8NHA4 323 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 HAS2Q92819 552 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 TM2D1Q9BX74 207 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 GHRLQ9UBU3 117 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 B3GALT1Q9Y5Z6 326 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 POMT1Q9Y6A1 747 aa9.95□□□□□ -0.82
SRP54-213ENST00000556994 SDK2Q58EX2 2172 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 SHANK1Q9Y566 2161 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms