RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 RSPO1Q2MKA7 263 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ENTPD8Q5MY95 495 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 HIST2H3PS2Q5TEC6 136 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 REEP3Q6NUK4 255 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 HIST2H3AQ71DI3 136 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 LNX2Q8N448 690 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF561Q8N587 486 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF596Q8TC21 504 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 AGR3Q8TD06 166 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 DLX4Q92988 240 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 UBE2E2Q96LR5 201 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ZBTB18Q99592 522 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TINAGL1Q9GZM7 467 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 PAIP1Q9H074 479 aaKnown RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TLNRD1Q9H1K6 362 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 OR51J1Q9H342 316 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 RABEP2Q9H5N1 569 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 MEPEQ9NQ76 525 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 MAGEL2Q9UJ55 1249 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 EMCNQ9ULC0 261 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 VSIG4Q9Y279 399 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 HSPG2P98160 4391 aa4.4□□□□□ -1.7
ATXN3-245ENST00000556958 IGHV2-26A0A0B4J1V2 119 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 OR6C68A6NDL8 312 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM210A6NLX4 147 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ANXA2P2A6NMY6 339 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 OOSP1A8MZH6 123 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RIPK2O43353 540 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 XRCC3O43542 346 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 SLC16A7O60669 478 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 IGHG4P01861 327 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 TFF1P04155 84 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 IGF1P05019 195 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 CHRNGP07510 517 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 OR5H8P0DN80 308 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF823P16415 610 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 VDAC1P21796 283 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RBM34P42696 430 aaKnown RBP4.4□□□□□ -1.71
ATXN3-245ENST00000556958 SLC7A2P52569 658 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 DLX6P56179 175 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ESRRGP62508 458 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 TRAP1Q12931 704 aaKnown RBP4.4□□□□□ -1.71
ATXN3-245ENST00000556958 FADDQ13158 208 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF273Q14593 569 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RGNQ15493 299 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 KRTAP27-1Q3LI81 207 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ASPHD1Q5U4P2 390 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 AGBL2Q5U5Z8 902 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 SMARCD3Q6STE5 483 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 LINC00322Q6ZN03 302 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-245ENST00000556958 NAA40Q86UY6 237 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 FTMTQ8N4E7 242 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 OR56B2PQ8NGI1 322 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 OR2AJ1Q8NGZ0 328 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF671Q8TAW3 534 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RGP1Q92546 391 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ARPC1AQ92747 370 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 MAL2Q969L2 176 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 SPTSSAQ969W0 71 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF426Q9BUY5 554 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RTL8AQ9BWD3 113 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 CLEC7AQ9BXN2 247 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 PARD6BQ9BYG5 372 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RERGLQ9H628 205 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 ING3Q9NXR8 418 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 RASL12Q9NYN1 266 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 GRHPRQ9UBQ7 328 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 SESN1Q9Y6P5 492 aa4.4□□□□□ -1.71
ATXN3-245ENST00000556958 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PRSS37A4D1T9 235 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 LINC01619G3V211 115 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 M0R135 149 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PSMD9O00233 223 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ARPC1BO15143 372 aaKnown RBP4.39□□□□□ -1.71
ATXN3-245ENST00000556958 OR5F1O95221 314 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 IGLV1-51P01701 117 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 SHBGP04278 402 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 IL6P05231 212 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 INAFM2P0DMQ5 153 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PRDX2P32119 198 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 CENPAP49450 140 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 VSNL1P62760 191 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 CDK6Q00534 326 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 BDH1Q02338 343 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ANKDD1AQ495B1 522 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 OR52W1Q6IF63 320 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 KCTD8Q6ZWB6 473 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 WDR86Q86TI4 376 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 RTN4RL2Q86UN3 420 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ABHD12Q8N2K0 398 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 C5orf56Q8N8D9 126 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 OR4P4Q8NGL7 312 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PHLDA1Q8WV24 401 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-245ENST00000556958 NUDT11Q96G61 164 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF799Q96GE5 643 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms