RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NOXO1Q8NFA2 376 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 OR1L3Q8NH93 324 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 STT3BQ8TCJ2 826 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 PPP1R1CQ8WVI7 109 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 SPSB1Q96BD6 273 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 ZNF501Q96CX3 271 aaPredicted RBP5.36□□□□□ -1.55
CPSF2-205ENST00000556622 TMEM41AQ96HV5 264 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 OR6C1Q96RD1 312 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 DDA1Q9BW61 102 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 SF3B5Q9BWJ5 86 aaKnown RBP5.36□□□□□ -1.55
CPSF2-205ENST00000556622 TMEM59Q9BXS4 323 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 MRPL13Q9BYD1 178 aaKnown RBP5.36□□□□□ -1.55
CPSF2-205ENST00000556622 DEFB126Q9BYW3 111 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 ULBP3Q9BZM4 244 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 PLEKHA2Q9HB19 425 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 G6PC2Q9NQR9 355 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 CA10Q9NS85 328 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 FAM206AQ9NX38 181 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 KLHL13Q9P2N7 655 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 FBXL2Q9UKC9 423 aa5.36□□□□□ -1.55
CPSF2-205ENST00000556622 MRPS28Q9Y2Q9 187 aaKnown RBP5.36□□□□□ -1.55
CPSF2-205ENST00000556622 USP24Q9UPU5 2620 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SEC16AO15027 2179 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SPTBP11277 2137 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 BORCS7-ASMTA0A0B4J1R7 106 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 TEX13DA0A0J9YY54 714 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 TMEM14DPA8MWL7 114 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 FAM25EA8MYX2 175 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 C9J4A7 227 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 G3V3Q6 166 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 H3BMH7 237 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 RAB27BO00194 218 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SULT2B1O00204 365 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 HMGB3O15347 200 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SCRG1O75711 98 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SPDEFO95238 335 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SFT2D2O95562 160 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PNPP00491 289 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 CSTBP04080 98 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 LIPCP11150 499 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 FOLR1P15328 257 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 HIST1H1DP16402 221 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ZNF17P17021 662 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 MSR1P21757 451 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 S100GP29377 79 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 RBMXP38159 391 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PMELP40967 661 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 CASRP41180 1078 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 DSCR4P56555 118 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 MFGE8Q08431 387 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SPOCK1Q08629 439 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 MRPL49Q13405 166 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 FOXE3Q13461 319 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 KCNAB1Q14722 419 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ZNF169Q14929 603 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ODF4Q2M2E3 257 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 GXYLT1Q4G148 440 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PRSS54Q6PEW0 395 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 TFAP2EQ6VUC0 442 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ABHD12BQ7Z5M8 362 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ANKRD37Q7Z713 158 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PPP1R3BQ86XI6 285 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SGPP2Q8IWX5 399 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PRR22Q8IZ63 422 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 FAM185AQ8N0U4 392 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 METTL27Q8N6F8 245 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ZNF283Q8N7M2 679 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 BMPERQ8N8U9 685 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SLC30A7Q8NEW0 376 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 OR51A4Q8NGJ6 313 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 OR51A2Q8NGJ7 313 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 OR1J2Q8NGS2 313 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 RNF138Q8WVD3 245 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 C11orf40Q8WZ69 217 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 EXTL1Q92935 676 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 TSLPQ969D9 159 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SGCZQ96LD1 299 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ZNF416Q9BWM5 594 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 METTL8Q9H825 291 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 UNKLQ9H9P5 680 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 NDRG3Q9UGV2 375 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 RALYQ9UKM9 306 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 PADI1Q9ULC6 663 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 ANAPC10Q9UM13 185 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 TMEM184BQ9Y519 407 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 MRPS18BQ9Y676 258 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 FRYQ5TBA9 3013 aa5.35□□□□□ -1.55
CPSF2-205ENST00000556622 SNRNP200O75643 2136 aaKnown RBP5.35□□□□□ -1.55
CPSF2-205ENST00000556622 COL27A1Q8IZC6 1860 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-205ENST00000556622 TRBV11-1A0A0K0K1C0 115 aa5.34□□□□□ -1.55
CPSF2-205ENST00000556622 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
CPSF2-205ENST00000556622 C13orf42A0A1B0GVH6 325 aa5.34□□□□□ -1.55
CPSF2-205ENST00000556622 TMEM235A6NFC5 223 aa5.34□□□□□ -1.55
CPSF2-205ENST00000556622 AQP7P3A6NL99 342 aa5.34□□□□□ -1.55
CPSF2-205ENST00000556622 PRR32B1ATL7 298 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms