RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FAIM2Q9BWQ8 316 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 LPAR5Q9H1C0 372 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 NELFAQ9H3P2 528 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 ELL3Q9HB65 397 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 OR1A1Q9P1Q5 309 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 RPS6KB2Q9UBS0 482 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 FBXW11Q9UKB1 542 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 BOKQ9UMX3 212 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 WIPI2Q9Y4P8 454 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 COL3A1P02461 1466 aaPredicted RBP5.43□□□□□ -1.54
TDP1-215ENST00000556498 PIK3C2AO00443 1686 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 SHPRHQ149N8 1683 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 CDK5RAP2Q96SN8 1893 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 MON2Q7Z3U7 1717 aa5.43□□□□□ -1.54
TDP1-215ENST00000556498 LAMB4A4D0S4 1761 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 A0A087WX48 190 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 A0A0B4J2A0 478 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PQF6 199 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 FEZF1A0PJY2 475 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 UBE2QL1A1L167 161 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 PRSS37A4D1T9 235 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TMEM150BA6NC51 233 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE12JA6NER3 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 FRG2CA6NGY1 282 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 SLC38A8A6NNN8 435 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 B4DEV8 164 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GABRPO00591 440 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 HSD17B6O14756 317 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 NBR2O15453 112 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 REM1O75628 298 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CNMDO75829 334 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE7O76087 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CRYAAP02489 173 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 APOA2P02652 100 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MAS1P04201 325 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MMP7P09237 267 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CD1DP15813 335 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 ATF1P18846 271 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 RPS12P25398 132 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 NPY1RP25929 384 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 KLRC2P26717 231 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GABRA3P34903 492 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CDKN2BP42772 138 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 SLC6A9P48067 706 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TFPI2P48307 235 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 DAP3P51398 398 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 GPM6AP51674 278 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 VAMP7P51809 220 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 DLX6P56179 175 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR12D2P58182 307 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TAS2R20P59543 309 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 RHOAP61586 193 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 ZXDAP98168 799 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CD69Q07108 199 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TMEM267Q0VDI3 215 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 GAGE4Q13068 117 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 DHRS2Q13268 280 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 RUNX3Q13761 415 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 RGNQ15493 299 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 HIST3H3Q16695 136 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MS4A18Q3C1V0 323 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CCSMST1Q4G0I0 132 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 ATP6AP1LQ52LC2 224 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 SPANXN3Q5MJ09 141 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 DCST2Q5T1A1 773 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TMEM211Q6ICI0 200 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 LAIR2Q6ISS4 152 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TMEM173Q86WV6 379 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 ZNF761Q86XN6 746 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 SP8Q8IXZ3 490 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 ZNF676Q8N7Q3 588 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 STPG4Q8N801 248 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 TCEANCQ8N8B7 351 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 ARL14EPQ8N8R7 260 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR5A1Q8NGJ0 315 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR51A2Q8NGJ7 313 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR51T1Q8NGJ9 327 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR10G9Q8NGN4 311 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR6K2Q8NGY2 324 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OR2AE1Q8NHA4 323 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 SFXN5Q8TD22 340 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 APOBEC3DQ96AK3 386 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 SMIM19Q96E16 107 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CAPNS2Q96L46 248 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 OXGR1Q96P68 337 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MBOAT4Q96T53 435 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 GPER1Q99527 375 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 PITX2Q99697 317 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 SLC25A33Q9BSK2 321 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MCRIP2Q9BUT9 160 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CHRNA10Q9GZZ6 450 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 ATG5Q9H1Y0 275 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 HINT3Q9NQE9 182 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 ASIC5Q9NY37 505 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms