RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DGCR6LQ9BY27 220 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 ABCB9Q9NP78 766 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 CMC2Q9NRP2 79 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 AASSQ9UDR5 926 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 MPC1Q9Y5U8 109 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 A0A1B0GW55 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 TMEM210A6NLX4 147 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 RNASEK-C17orf49H0YIS7 233 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 M0R1W7 72 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 TNFRSF11BO00300 401 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ACOT8O14734 319 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CST4P01036 141 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L2P0CJ85 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L3P0CJ86 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L4P0CJ87 422 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L5P0CJ88 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L6P0CJ89 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L7P0CJ90 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 IGLL1P15814 213 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 PAX6P26367 422 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 OPRL1P41146 370 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CX3CR1P49238 355 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CAV3P56539 151 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 RAP2BP61225 183 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CSNK2BP67870 215 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-220ENST00000556486 IL5RAQ01344 420 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 KLRD1Q13241 179 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 GK3PQ14409 553 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 TAF13Q15543 124 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 LY6EQ16553 131 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 NCR3LG1Q68D85 454 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4L9Q6RFH8 374 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF788Q6ZQV5 615 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DPY19L4Q7Z388 723 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 FAM216BQ8N7L0 139 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 REEP6Q96HR9 211 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 AJUBAQ96IF1 538 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 RAB3IPQ96QF0 476 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CDRT15Q96T59 188 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CCL13Q99616 98 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ABHD6Q9BV23 337 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 TSSK6Q9BXA6 273 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 MAGIXQ9H6Y5 334 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 SIRT7Q9NRC8 400 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 CENPMQ9NSP4 180 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 NDE1Q9NXR1 346 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 HAO2Q9NYQ3 351 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ACTR3BQ9P1U1 418 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF319Q9P2F9 582 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 DUX4Q9UBX2 424 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF391Q9UJN7 358 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 RHBDD3Q9Y3P4 386 aa8.15□□□□□ -1.1
SCFD1-220ENST00000556486 RYR2Q92736 4967 aa8.15□□□□□ -1.11
SCFD1-220ENST00000556486 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.11
SCFD1-220ENST00000556486 IGHV3OR15-7A0A075B7D8 119 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 A0A087X0M5 115 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 A0A1B0GX30 115 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 BTBD17A6NE02 478 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 ANXA2P2A6NMY6 339 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 CDIPTO14735 213 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 NPFFO15130 113 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 NDUFB3O43676 98 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 CCNB2O95067 398 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 IFNGP01579 166 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 GYPBP06028 91 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 CLUP10909 449 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 ZNF3P17036 446 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 EEF1B2P24534 225 aaKnown RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 DCTDP32321 178 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 MSX2P35548 267 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 UBE2E1P51965 193 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 ZNF121P58317 390 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 AANATQ16613 207 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 PLA1AQ53H76 456 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 LRRC10Q5BKY1 277 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 C11orf88Q6PI97 169 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 SHFQ7M4L6 423 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 TIGD4Q8IY51 512 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 OR8H2Q8N162 312 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 AQP11Q8NBQ7 271 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 BEND2Q8NDZ0 799 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 OR6K6Q8NGW6 343 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 ANGPTL6Q8NI99 470 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 R3HDM4Q96D70 268 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 MED30Q96HR3 178 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 INTS14Q96SY0 518 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 MICU1Q9BPX6 476 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 PAPOLGQ9BWT3 736 aaKnown RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 METTL8Q9H825 291 aaKnown RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 GAR1Q9NY12 217 aaKnown RBP8.14□□□□□ -1.11
SCFD1-220ENST00000556486 ONECUT1Q9UBC0 465 aa8.14□□□□□ -1.11
SCFD1-220ENST00000556486 WI2-2373I1.2A0A1W2PRP0 233 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 ARRDC5A6NEK1 342 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 RIIAD1A6NNX1 92 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 SIGLEC5O15389 551 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 GLCEO94923 617 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 CD28P10747 220 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms