RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 WDR86Q86TI4 376 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 DTX2Q86UW9 622 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 CALHM1Q8IU99 346 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SAXO1Q8IYX7 474 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SCCPDHQ8NBX0 429 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 OR51D1Q8NGF3 324 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 OR51F2Q8NH61 342 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 TBC1D15Q8TC07 691 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SLC25A28Q96A46 364 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 MEGF10Q96KG7 1140 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 VRK1Q99986 396 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 NXF2Q9GZY0 626 aaKnown RBP9.36□□□□□ -0.91
TMEM260-208ENST00000555905 METTL9Q9H1A3 318 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 SMURF1Q9HCE7 757 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 PCDHB16Q9NRJ7 776 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 ETV7Q9Y603 341 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 PKDREJQ9NTG1 2253 aa9.36□□□□□ -0.91
TMEM260-208ENST00000555905 UTP20O75691 2785 aaKnown RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 RAI1Q7Z5J4 1906 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 A0A0B4J203 849 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 IGHV3-64DA0A0J9YX35 117 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 RGS5O15539 181 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 PTBP3O95758 552 aaKnown RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 CSTBP04080 98 aaKnown RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 SOD3P08294 240 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 DANCRP0C864 163 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 MPZP25189 248 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 S100A5P33763 92 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 CCL8P80075 99 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 IL24Q13007 206 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 C2orf76Q3KRA6 126 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 SLC22A6Q4U2R8 563 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 C11orf71Q6IPW1 123 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 CRIP3Q6Q6R5 217 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 ZCCHC24Q8N2G6 241 aaKnown RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 PXT1Q8NFP0 134 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 KCNG3Q8TAE7 436 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 LGALS14Q8TCE9 139 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 ITLN1Q8WWA0 313 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 AQP3Q92482 292 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 ERGIC1Q969X5 290 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 C14orf79Q96F83 325 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 TRAF4Q9BUZ4 470 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 HELZ2Q9BYK8 2649 aaKnown RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 RAB1BQ9H0U4 201 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 CST11Q9H112 138 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 TLNRD1Q9H1K6 362 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 SAP30LQ9HAJ7 183 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 UFSP2Q9NUQ7 469 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 OR5V1Q9UGF6 321 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 ADAM30Q9UKF2 790 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 SPATA2Q9UM82 520 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 LAMP3Q9UQV4 416 aa9.35□□□□□ -0.91
TMEM260-208ENST00000555905 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-208ENST00000555905 hCG_1807616A0A1W2PRN6 198 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CDIPTO14735 213 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 SYNGR1O43759 233 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CRTAPO75718 401 aaPredicted RBP9.34□□□□□ -0.91
TMEM260-208ENST00000555905 KDM4BO94953 1096 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 PAHP00439 452 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CD8AP01732 235 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 SERPINA2P20848 420 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 COL8A1P27658 744 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 SSTR2P30874 369 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 GATA4P43694 442 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 BMXP51813 675 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 ART1P52961 327 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 MPPED2Q15777 294 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 UBE2NLQ5JXB2 153 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 OR2W3Q7Z3T1 314 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 C1QL2Q7Z5L3 287 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 Q8IYB0 196 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 SAMD12Q8N8I0 201 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 SLAMF9Q96A28 289 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CEP19Q96LK0 163 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CACNG6Q9BXT2 260 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 PLEKHF2Q9H8W4 249 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 RHOFQ9HBH0 211 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 C1orf123Q9NWV4 160 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 IL36GQ9NZH8 169 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 ARFGEF3Q5TH69 2177 aa9.34□□□□□ -0.91
TMEM260-208ENST00000555905 CHD3Q12873 2000 aaKnown RBP9.33□□□□□ -0.92
TMEM260-208ENST00000555905 TMEM272A0A1B0GTI8 110 aa9.33□□□□□ -0.92
TMEM260-208ENST00000555905 LRRC30A6NM36 301 aa9.33□□□□□ -0.92
TMEM260-208ENST00000555905 HPGDSO60760 199 aa9.33□□□□□ -0.92
TMEM260-208ENST00000555905 RHBDL1O75783 438 aa9.33□□□□□ -0.92
TMEM260-208ENST00000555905 HTR3BO95264 441 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms