RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 THBS4P35443 961 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ARR3P36575 388 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 RFX2P48378 723 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 TAS2R20P59543 309 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 PSG4Q00888 419 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 CD83Q01151 205 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 PMP22Q01453 160 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 PLP2Q04941 152 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 C3AR1Q16581 482 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 RSBN1Q5VWQ0 802 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ASPHD2Q6ICH7 369 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 OR2A2Q6IF42 318 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF529Q6P280 563 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF627Q7L945 461 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 KRT74Q7RTS7 529 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 PRSS45Q7RTY3 260 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 NUFIP2Q7Z417 695 aaKnown RBP5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ADGRE4PQ86SQ3 457 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 OR13C9Q8NGT0 318 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 OR14K1Q8NGZ2 314 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 SMIM4Q8WVI0 70 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ITFG2Q969R8 447 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 SLC25A28Q96A46 364 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 PTX4Q96A99 478 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 SLC25A38Q96DW6 304 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ADAT3Q96EY9 351 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ZC3HAV1LQ96H79 300 aaKnown RBP5.9□□□□□ -1.46
SLIRP-204ENST00000555890 WNT5BQ9H1J7 359 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ATG5Q9H1Y0 275 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 RGCCQ9H4X1 137 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 METTL17Q9H7H0 456 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-204ENST00000555890 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF319Q9P2F9 582 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ATPIF1Q9UII2 106 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 RAB22AQ9UL26 194 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 CSAG2Q9Y5P2 127 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 CACNG2Q9Y698 323 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 V9GYS6 101 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 HRNRQ86YZ3 2850 aaPredicted RBP5.9□□□□□ -1.47
SLIRP-204ENST00000555890 TRAV18A0A075B6X5 111 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 TMEM272A0A1B0GTI8 110 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 OR14I1A6ND48 311 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 NAP1L6A6NFF2 107 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 DHRS7CA6NNS2 312 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 XRCC2O43543 280 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SS18L1O75177 396 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 CTAG2O75638 210 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 RBBP9O75884 186 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SCGNO76038 276 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 TGM6O95932 706 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 IGLV3-1P01715 115 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 CRYABP02511 175 aaKnown RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 MMP7P09237 267 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 CD3GP09693 182 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 PATE4P0C8F1 98 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 UBBP0CG47 229 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 COX5BP10606 129 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 GABRA1P14867 456 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 ABOP16442 354 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 MPGP29372 298 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 AGTR1P30556 359 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF93P35789 620 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SERPINF1P36955 418 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 KIR2DL3P43628 341 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 OR3A2P47893 321 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 PTH2RP49190 550 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 DGCR2P98153 550 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 TGFBR3Q03167 851 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 RIPPLY1Q0D2K3 151 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SNTB2Q13425 540 aaKnown RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 DYRK1AQ13627 763 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 GPR176Q14439 515 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 CDSNQ15517 529 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 RSPO1Q2MKA7 263 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 KRTAP27-1Q3LI81 207 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 PABPC1L2AQ5JQF8 200 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 FBXW9Q5XUX1 488 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 RAB12Q6IQ22 244 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 RPUSD3Q6P087 351 aaKnown RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 Q6ZSR3 168 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 UTS2BQ765I0 119 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 NAA40Q86UY6 237 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 FAM90A1Q86YD7 464 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SIAH3Q8IW03 269 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 IZUMO1Q8IYV9 350 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 CADM3Q8N126 398 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 PNLDC1Q8NA58 520 aaKnown RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 ACBD4Q8NC06 268 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 DUSP18Q8NEJ0 188 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SEMA6DQ8NFY4 1073 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 OR52N4Q8NGI2 321 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 OR51A2Q8NGJ7 313 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 AKR7LQ8NHP1 331 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SLC7A6Q92536 515 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 AKAP1Q92667 903 aaKnown RBP eCLIP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 NRGNQ92686 78 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 YIPF5Q969M3 257 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 FAM46BQ96A09 425 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SGK3Q96BR1 496 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms