RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 P04436 131 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ALDOBP05062 364 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 C8GP07360 202 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 BPGMP07738 259 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR8U8P0C7N1 319 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 FOLR2P14207 255 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 HIST1H1BP16401 226 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 AKR1C4P17516 323 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 KITLGP21583 273 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 GDF1P27539 372 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 GABRR2P28476 465 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 S100GP29377 79 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 PRDX3P30048 256 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 HTR1FP30939 366 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 DDOSTP39656 456 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 AKR1C3P42330 323 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 RBM34P42696 430 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 UGT2B15P54855 530 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CDKN2DP55273 166 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 RAB25P57735 213 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 NCALDP61601 193 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SELENOTP62341 195 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 PPP3R1P63098 170 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 TWF1Q12792 350 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ECH1Q13011 328 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 MLLT11Q13015 90 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 TGIF1Q15583 401 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR8G1Q15617 311 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 NSDHLQ15738 373 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 PRSS8Q16651 343 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CARD16Q5EG05 197 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SAMD13Q5VXD3 122 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC22A10Q63ZE4 541 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 STEAP4Q687X5 459 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OLFML2AQ68BL7 652 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 TMEM205Q6UW68 189 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 DRAM2Q6UX65 266 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 TOMM20LQ6UXN7 152 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 DNM1P46Q6ZS02 220 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OLIG3Q7RTU3 272 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR2W3Q7Z3T1 314 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 S100A7AQ86SG5 101 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 GALNT10Q86SR1 603 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 MARCH9Q86YJ5 346 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 C8orf59Q8N0T1 100 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 KIR2DL5AQ8N109 375 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CADM2Q8N3J6 435 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ATPAF2Q8N5M1 289 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 JAGN1Q8N5M9 183 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ACBD7Q8N6N7 88 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 PACRGLQ8N7B6 248 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 POM121L12Q8N7R1 296 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ACOT4Q8N9L9 421 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 LRRC75AQ8NAA5 344 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR4F6Q8NGB9 312 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR4K2Q8NGD2 314 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR2A12Q8NGT7 310 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR8U1Q8NH10 309 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 KIR2DL5BQ8NHK3 375 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF420Q8TAQ5 688 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SYNPRQ8TBG9 265 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ZPLD1Q8TCW7 415 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 TFGQ92734 400 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 YIPF6Q96EC8 236 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 WDR34Q96EX3 536 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CMTM7Q96FZ5 175 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 NARS2Q96I59 477 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF184Q99676 751 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SOSTQ9BQB4 213 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 VPS25Q9BRG1 176 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 RIOK2Q9BVS4 552 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OSBPL11Q9BXB4 747 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 SRXN1Q9BYN0 137 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 WFDC1Q9HC57 220 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 C6orf50Q9HD87 102 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CLN6Q9NWW5 311 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CALML5Q9NZT1 146 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 METTL1Q9UBP6 276 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OR12D3Q9UGF7 316 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 GNG8Q9UK08 70 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 KLK13Q9UKR3 277 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 FARSAQ9Y285 508 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 RPL36Q9Y3U8 105 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 MTCH2Q9Y6C9 303 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 V9GYY9 64 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OVOS2A0A0J9YW53 1432 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 RTEL1-TNFRSF6BF6WH68 1400 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 OVOS2Q6IE36 1432 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 CCDC88BA6NC98 1476 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 NUP153P49790 1475 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 NRXN1Q9ULB1 1477 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 KIF26BQ2KJY2 2108 aa2.32□□□□□ -2.04
MTHFD1-212ENST00000555858 IGHV3-35A0A0C4DH35 117 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 ARL5CA6NH57 179 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 OR5B21A6NL26 309 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 ANKRD63C9JTQ0 380 aa2.31□□□□□ -2.04
MTHFD1-212ENST00000555858 C15orf65H3BRN8 121 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms