RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TBC1D21Q8IYX1 336 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 JAGN1Q8N5M9 183 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 OR4C5Q8NGB2 326 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 AKR7LQ8NHP1 331 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 ZNF625Q96I27 306 aaPredicted RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 TMEM175Q9BSA9 504 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 STMN4Q9H169 189 aaPredicted RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 TXNIPQ9H3M7 391 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 LRRC19Q9H756 370 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 TMEM100Q9NV29 134 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 COX16Q9P0S2 106 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 SAR1BQ9Y6B6 198 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 NPHP4O75161 1426 aaPredicted RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 IGHV3-21A0A0B4J1V1 117 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 A8MWP4 228 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 LEUTXA8MZ59 168 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 ISLRO14498 428 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 UPK1BO75841 260 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 SMC2O95347 1197 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 TDP2O95551 362 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 SNRPAP09012 282 aaKnown RBP0.6□□□□□ -2.31
SNX6-204ENST00000555541 GZMAP12544 262 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 STOMP27105 288 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 RAB11AP62491 216 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 PSG4Q00888 419 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 SS18Q15532 418 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 CST6Q15828 149 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 ZFP82Q8N141 532 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 ZNF555Q8NEP9 628 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 OR8A1Q8NGG7 326 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 GPR119Q8TDV5 335 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 RCN3Q96D15 328 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 RASD2Q96D21 266 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 TPD52L3Q96J77 140 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 AGMATQ9BSE5 352 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 PTTG3PQ9NZH4 202 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 CCL26Q9Y258 94 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 FADS3Q9Y5Q0 445 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 MROH7Q68CQ1 1323 aa0.6□□□□□ -2.31
SNX6-204ENST00000555541 IGKV1D-37A0A075B6S9 117 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 IGHV3-43A0A0B4J1X8 118 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 TRAV8-6A0A0B4J262 113 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 KBTBD11-OT1A0A1B0GTJ5 212 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 GOLGA8JA6NMD2 632 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 H3BMM0 161 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 K7ERS5 55 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 HLA-HP01893 362 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 GOLGA8HP0CJ92 632 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 MAGEA6P43360 314 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 UQCRFS1P47985 274 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 ELOCQ15369 112 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 ALKBH6Q3KRA9 238 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 Q6ZRU5 148 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 LYZL2Q7Z4W2 148 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 SCD5Q86SK9 330 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 HS3ST5Q8IZT8 346 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 OR2V1Q8NHB1 315 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 BLNKQ8WV28 456 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 BAALCQ8WXS3 180 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 NRGNQ92686 78 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 UBE2WQ96B02 151 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 CXCL16Q9H2A7 254 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 VAX2Q9UIW0 290 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 OR51B4Q9Y5P0 310 aa0.59□□□□□ -2.31
SNX6-204ENST00000555541 SETD1AO15047 1707 aaKnown RBP0.58□□□□□ -2.32
SNX6-204ENST00000555541 OR2AG2A6NM03 316 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 K7EPK0 472 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 CRTAPO75718 401 aaPredicted RBP0.58□□□□□ -2.32
SNX6-204ENST00000555541 OPN1SWP03999 348 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 CGB3P0DN86 165 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 COILP38432 576 aaPredicted RBP0.58□□□□□ -2.32
SNX6-204ENST00000555541 SLC18A1P54219 525 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 ZNF738Q8NE65 137 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 OR52E5Q8NH55 327 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 LMX1AQ8TE12 382 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 UBE2E2Q96LR5 201 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 SCGB3A2Q96PL1 93 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 REEP1Q9H902 201 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 RHOFQ9HBH0 211 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 ZNF160Q9HCG1 818 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 U3KQK5 164 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 FBN2P35556 2912 aa0.58□□□□□ -2.32
SNX6-204ENST00000555541 A0A0B4J2E0 115 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 KNCNA6PVL3 124 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 BCKDKO14874 412 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 ZBTB5O15062 677 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 RGS5O15539 181 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 PSIP1O75475 530 aaKnown RBP0.57□□□□□ -2.32
SNX6-204ENST00000555541 RAB36O95755 333 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 TACSTD2P09758 323 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 PRB4P10163 310 aaPredicted RBP0.57□□□□□ -2.32
SNX6-204ENST00000555541 CRABP2P29373 138 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 ITIH4Q14624 930 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 MAJINQ3KP22 176 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 TNFRSF14Q92956 283 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 GABARAPL1Q9H0R8 117 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 TAC3Q9UHF0 121 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 NAGKQ9UJ70 344 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 COL4A2P08572 1712 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 PLEKHG2Q9H7P9 1386 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms