RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
SNX6-203ENST00000555416 PCDHGB1Q9Y5G3 927 aa11.3□□□□□ -0.6
SNX6-203ENST00000555416 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 F8VVB4 439 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 F8VWA3 439 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 FADS2O95864 444 aaKnown RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 PLATP00750 562 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 HTR1AP08908 422 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 UBCP0CG48 685 aaKnown RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 MPZP25189 248 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 ETV1P50549 477 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 DLX1P56177 255 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 HILS1P60008 231 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 ALKBH1Q13686 389 aaKnown RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 ACP7Q6ZNF0 438 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 BPIFB2Q8N4F0 458 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 CD177Q8N6Q3 437 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 ZDHHC22Q8N966 263 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 SPATA3Q8NHX4 192 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 ZNF671Q8TAW3 534 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 TMIGD2Q96BF3 282 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 FGGYQ96C11 551 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 C1orf147Q96MC9 270 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 PCGF1Q9BSM1 259 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 CHST5Q9GZS9 411 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 RPL36Q9Y3U8 105 aaKnown RBP11.29□□□□□ -0.6
SNX6-203ENST00000555416 MAB21L2Q9Y586 359 aa11.29□□□□□ -0.6
SNX6-203ENST00000555416 MDFIC2A0A1B0GVS7 189 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 SIGLEC5O15389 551 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 NDUFB3O43676 98 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
SNX6-203ENST00000555416 INMTO95050 263 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ISG15P05161 165 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ACAA1P09110 424 aaPredicted RBP11.28□□□□□ -0.6
SNX6-203ENST00000555416 GABRA2P47869 451 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 CCR9P51686 369 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ERVK11-1P61568 191 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ARF6P62330 175 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ACTA2P62736 377 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ACTG2P63267 376 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 OR2G6Q5TZ20 316 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 CD276Q5ZPR3 534 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 USP43Q70EL4 1123 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ZNF573Q86YE8 665 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ZNRF1Q8ND25 227 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
SNX6-203ENST00000555416 NRG4Q8WWG1 115 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 ADI1Q9BV57 179 aa11.28□□□□□ -0.6
SNX6-203ENST00000555416 A0A0A6YYJ9 748 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 ERICH4A6NGS2 130 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 RFPL4AA6NLU0 287 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 RFPL4AL1F8VTS6 287 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 ZFPL1O95159 310 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 IL13RA1P78552 427 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.61
SNX6-203ENST00000555416 KLHL22Q53GT1 634 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 RGP1Q92546 391 aaPredicted RBP11.27□□□□□ -0.61
SNX6-203ENST00000555416 SLAMF9Q96A28 289 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 CNTD2Q9H8S5 307 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 INPP5EQ9NRR6 644 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 SLC25A10Q9UBX3 287 aaPredicted RBP11.27□□□□□ -0.61
SNX6-203ENST00000555416 CLEC2DQ9UHP7 191 aa11.27□□□□□ -0.61
SNX6-203ENST00000555416 SIRT4Q9Y6E7 314 aaPredicted RBP11.27□□□□□ -0.61
SNX6-203ENST00000555416 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
SNX6-203ENST00000555416 NKX6-3A6NJ46 265 aa11.26□□□□□ -0.61
SNX6-203ENST00000555416 TOX4O94842 621 aa11.26□□□□□ -0.61
SNX6-203ENST00000555416 NXPH2O95156 264 aa11.26□□□□□ -0.61
SNX6-203ENST00000555416 ECDO95905 644 aaPredicted RBP11.26□□□□□ -0.61
SNX6-203ENST00000555416 LIPFP07098 398 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms