RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR5T2Q8NGG2 359 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 PYDC1Q8WXC3 89 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 RORBQ92753 470 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 MYCBPQ99417 103 aaPredicted RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 NRIP2Q9BQI9 281 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 TTTY10Q9BZA0 68 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 METTL8Q9H825 291 aaKnown RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 HES4Q9HCC6 221 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 SNTG1Q9NSN8 517 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 ONECUT1Q9UBC0 465 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4Q9UBX2 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 GTF2A1LQ9UNN4 478 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 PCDHGB1Q9Y5G3 927 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 SOX21Q9Y651 276 aaPredicted RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 A0A1W2PPH5 198 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 ANKRD61A6NGH8 418 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 H3BNX3 289 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 J3QRE1 110 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 GATBO75879 557 aaKnown RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 NDUFA7O95182 113 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 SERPINA3P01011 423 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 EEF1B2P24534 225 aaKnown RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 HAAOP46952 286 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 UBE2E1P51965 193 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 ELF3P78545 371 aaPredicted RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 IL24Q13007 206 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 KPNB1Q14974 876 aaKnown RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 RUSC1-AS1Q66K80 236 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 FDX2Q6P4F2 183 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 FAM220AQ7Z4H9 259 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 CALHM1Q8IU99 346 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 Q8N7P7 452 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 OR10H4Q8NGA5 316 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 OR5D13Q8NGL4 314 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 OR4F5Q8NH21 305 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 PP6455Q8WZ26 134 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 H1FXQ92522 213 aaKnown RBP9.73□□□□□ -0.85
VRK1-204ENST00000555351 DYRK2Q92630 601 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 DUX5Q96PT3 197 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 FAM234AQ9H0X4 552 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 DPAGT1Q9H3H5 408 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 PLEKHA1Q9HB21 404 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 SLC7A11Q9UPY5 501 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 MAB21L2Q9Y586 359 aa9.73□□□□□ -0.85
VRK1-204ENST00000555351 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 SLC1A7O00341 560 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 EI24O14681 340 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 MAGEB4O15481 346 aaPredicted RBP9.72□□□□□ -0.85
VRK1-204ENST00000555351 SYT7O43581 403 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 MPZL2O60487 215 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 RPP14O95059 124 aaKnown RBP9.72□□□□□ -0.85
VRK1-204ENST00000555351 KNG1P01042 644 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 ISG15P05161 165 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 CRYBA1P05813 215 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 FBP1P09467 338 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 SELLP14151 372 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 NDUFB7P17568 137 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 PRDX2P32119 198 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 IER3P46695 156 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 GABRA2P47869 451 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 CCR9P51686 369 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 GMFBP60983 142 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 ERVK11-1P61568 191 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 TMEM244Q5VVB8 128 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 FGFRL1Q8N441 504 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 DNAAF1Q8NEP3 725 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 TNFRSF14Q92956 283 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 MRPL48Q96GC5 212 aaKnown RBP9.72□□□□□ -0.85
VRK1-204ENST00000555351 TBX5Q99593 518 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 C9orf16Q9BUW7 83 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 CHST5Q9GZS9 411 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 ZNF696Q9H7X3 374 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 GPR173Q9NS66 373 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 FAM96BQ9Y3D0 163 aa9.72□□□□□ -0.85
VRK1-204ENST00000555351 A0A0U1RQK1 487 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 A0A1W2PQ09 198 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 RFPL4AA6NLU0 287 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 RFPL4AL1F8VTS6 287 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 RNASEK-C17orf49H0YIS7 233 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 EBAG9O00559 213 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 SYNGR1O43759 233 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 NXPH2O95156 264 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 FUT6P51993 359 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 ACTA2P62736 377 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 ACTG2P63267 376 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 ZNF85Q03923 595 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 MIDNQ504T8 468 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 PRR31Q5SQ13 230 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 GDPGP1Q6ZNW5 385 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 PRSS35Q8N3Z0 413 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 ACBD7Q8N6N7 88 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 ZNRF1Q8ND25 227 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 TMEM185AQ8NFB2 350 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 Q96MT0 163 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 CHIAQ9BZP6 476 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms