RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 GNRHR2Q96P88 292 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 PBOV1Q9GZY1 135 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 FAM86C1Q9NVL1 165 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 WNT16Q9UBV4 365 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 BRWD1Q9NSI6 2320 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 IGLV3-32A0A0A0MS00 114 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 A0A1W2PNV4 684 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 A0A1W2PPE2 198 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 WISP1O95388 367 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 ONECUT2O95948 504 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 CYC1P08574 325 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 ALDH3B1P43353 468 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 TMEM50BP56557 158 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 PKIAP61925 76 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 HSF1Q00613 529 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 TLE3Q04726 772 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF616Q08AN1 781 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 IL13RA2Q14627 380 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 NKAIN1Q4KMZ8 207 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 HIKESHIQ53FT3 197 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 SOHLH1Q5JUK2 328 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 SSX9Q7RTT3 188 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF610Q8N9Z0 462 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 OR10H5Q8NGA6 315 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 SLAMF9Q96A28 289 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 MRGPRX4Q96LA9 322 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 NUDT22Q9BRQ3 303 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 NICN1Q9BSH3 213 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 FOXQ1Q9C009 403 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 PTGES2Q9H7Z7 377 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 SERINC1Q9NRX5 453 aa9.4□□□□□ -0.91
MTHFD1-210ENST00000555252 PCNX3Q9H6A9 2034 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 CRYM-AS1A6NIL9 109 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 NME2P1O60361 137 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 MPIG6BO95866 241 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ARG1P05089 322 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 KLK3P07288 261 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 BCKDHBP21953 392 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 PTGER4P35408 488 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ID4P47928 161 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF41P51814 821 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 FBXW4P57775 412 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 CSNK2A1P68400 391 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ARFRP1Q13795 201 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 TGIF1Q15583 401 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 C9orf152Q5JTZ5 239 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF574Q6ZN55 896 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF383Q8NA42 475 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 SUMF2Q8NBJ7 301 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 CSNK2A3Q8NEV1 391 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 OR13C9Q8NGT0 318 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 OR2I1PQ8NGU4 316 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 MAFIPQ8WZ33 124 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 NTNG2Q96CW9 530 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 WDR77Q9BQA1 342 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 DUSP23Q9BVJ7 150 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 PRDM13Q9H4Q3 707 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 KLHL13Q9P2N7 655 aa9.39□□□□□ -0.91
MTHFD1-210ENST00000555252 IGHV3-20A0A0C4DH32 117 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 LIPT2A6NK58 231 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 TSTD3H0UI37 97 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SOCS1O15524 211 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 HLA-DOBP13765 273 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 GLRA1P23415 457 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 RPS10P46783 165 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 POU3F1Q03052 451 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SHISA6Q6ZSJ9 500 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 LILRB2Q8N423 598 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 CD300LFQ8TDQ1 290 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SSC4DQ8WTU2 575 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SLAMF6Q96DU3 332 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 C14orf144Q96I85 54 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 OR10A2Q9H208 303 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 DOK5Q9P104 306 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 C19orf25Q9UFG5 118 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 TRBV11-1A0A0K0K1C0 115 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 FOXI3A8MTJ6 420 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 B4DEV8 164 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 K7N7A8 449 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 GPR37O15354 613 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 ZFAND5O76080 213 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 MPZL1O95297 269 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 DAOP14920 347 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 FOSL2P15408 326 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 IL11P20809 199 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 CCL1P22362 96 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 TAS2R60P59551 318 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 FOXF1Q12946 379 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 THEM4Q5T1C6 240 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 GGNBP1Q5YKI7 109 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 SULF2Q8IWU5 870 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 OR5AS1Q8N127 324 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 MR1Q95460 341 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms