RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OTPQ5XKR4 325 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 LIPHQ8WWY8 451 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 DNASE2BQ8WZ79 361 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 ELSPBP1Q96BH3 223 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 AMELYQ99218 206 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 GRHPRQ9UBQ7 328 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 PADI1Q9ULC6 663 aa13.81□□□□□ -0.2
SYNE3-203ENST00000554873 A0A1W2PPQ1 181 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TNFRSF4P43489 277 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CCL20P78556 96 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 HLA-DRB3P79483 266 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CD226Q15762 336 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 WBP2NLQ6ICG8 309 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CBLN3Q6UW01 205 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 LRRC69Q6ZNQ3 347 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 ARHGEF39Q8N4T4 335 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CYB561D1Q8N8Q1 229 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 NOXO1Q8NFA2 376 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 OR8G5Q8NG78 346 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TSPAN32Q96QS1 320 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 LRFN1Q9P244 771 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TUBD1Q9UJT1 453 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 LSM5Q9Y4Y9 91 aaKnown RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CLDN16Q9Y5I7 305 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TRANK1O15050 2925 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 A6NIZ1 184 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 HSPB1P04792 205 aaKnown RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 RPS2P15880 293 aaKnown RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CD82P27701 267 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 BRS3P32247 399 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 SOX8P57073 446 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 RAP1BP61224 184 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TFF2Q03403 129 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 RPL18Q07020 188 aaKnown RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 ZNF705AQ6ZN79 300 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM182Q6ZP80 229 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 GALNTL5Q7Z4T8 443 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 FAM185AQ8N0U4 392 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 TMEM18Q96B42 140 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-203ENST00000554873 OR10A5Q9H207 317 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 CHST11Q9NPF2 352 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 KIAA1456Q9P272 454 aa13.8□□□□□ -0.2
SYNE3-203ENST00000554873 COL4A2P08572 1712 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 XKRYO14609 159 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 GNB3P16520 340 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 CCKARP32238 428 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 PCK2Q16822 640 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 KTI12Q96EK9 354 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-203ENST00000554873 GABRG3Q99928 467 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 KLHDC3Q9BQ90 382 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 WSB1Q9Y6I7 421 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 TNFRSF10CO14798 259 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 PNMTP11086 282 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 IRF2P14316 349 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 HOXB2P14652 356 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 POLR2HP52434 150 aaKnown RBP13.79□□□□□ -0.2
SYNE3-203ENST00000554873 COL10A1Q03692 680 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 SPOCK1Q08629 439 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 GPM6BQ13491 265 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 SGPP2Q8IWX5 399 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 OR52N4Q8NGI2 321 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 OR4D6Q8NGJ1 314 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 SVIPQ8NHG7 77 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 FGF14Q92915 247 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 HLA-CQ95604 372 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 DGAT2Q96PD7 388 aa13.79□□□□□ -0.2
SYNE3-203ENST00000554873 E5RGE8 158 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 SCGNO76038 276 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 CDKN1BP46527 198 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 HSF1Q00613 529 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 ZNF440Q8IYI8 595 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 RNASE8Q8TDE3 154 aaKnown RBP13.78□□□□□ -0.2
SYNE3-203ENST00000554873 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 HIST1H2AAQ96QV6 131 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 C1orf123Q9NWV4 160 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 NSG2Q9Y328 171 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
SYNE3-203ENST00000554873 PDLIM4P50479 330 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.78□□□□□ -0.2
SYNE3-203ENST00000554873 SPSB3Q6PJ21 355 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 SRD5A3Q9H8P0 318 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 PRTFDC1Q9NRG1 225 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 GPR173Q9NS66 373 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 POLR3KQ9Y2Y1 108 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-203ENST00000554873 LIPGQ9Y5X9 500 aa13.78□□□□□ -0.2
SYNE3-203ENST00000554873 PPP5D1E7EU14 171 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 GPR137BO60478 399 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 OPN1MWP04001 364 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 CELA2BP08218 269 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-203ENST00000554873 IL6RP08887 468 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-203ENST00000554873 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms