RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SCO1O75880 301 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 PLGP00747 810 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 APOC1P02654 83 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 RLN2P04090 185 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 CRHP06850 196 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 PTHLHP12272 177 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 CD46P15529 392 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 CCL1P22362 96 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 ALDH3B1P43353 468 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 FBXW4P57775 412 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 TAS2R46P59540 309 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 QRFPP83859 136 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 HSF1Q00613 529 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 MFGE8Q08431 387 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 C2orf68Q2NKX9 166 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 DEFB113Q30KQ7 82 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 CDNFQ49AH0 187 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 PABPC1L2AQ5JQF8 200 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 C3orf33Q6P1S2 294 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 DCXRQ7Z4W1 244 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 TRAPPC6BQ86SZ2 158 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 LSRQ86X29 649 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 HOGA1Q86XE5 327 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 TMEM178AQ8NBL3 297 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 OR4K17Q8NGC6 315 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 OR56B1Q8NGI3 324 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 OR5L2Q8NGL0 311 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 OR1J2Q8NGS2 313 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 SLC25A43Q8WUT9 341 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 PPP1R1CQ8WVI7 109 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 FBXW5Q969U6 566 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 SLC25A36Q96CQ1 311 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 CPNE2Q96FN4 548 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 RASL10BQ96S79 203 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 SLC6A7Q99884 636 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 RTN4RQ9BZR6 473 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 TINAGL1Q9GZM7 467 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 CHMP1AQ9HD42 196 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 TMEM100Q9NV29 134 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 PURGQ9UJV8 347 aaKnown RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
SRP54-205ENST00000554803 PRELID3BQ9Y3B1 194 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 RHBDD3Q9Y3P4 386 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 HRH3Q9Y5N1 445 aa9.72□□□□□ -0.85
SRP54-205ENST00000554803 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 C17orf51A8MQB3 221 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 ZNF878C9JN71 531 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 F5H0A9 414 aaPredicted RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 SULT2B1O00204 365 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 SYT7O43581 403 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 NDUFA2O43678 99 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 ZNF20P17024 532 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 FPR2P25090 351 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 LAP3P28838 519 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 GNALP38405 381 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 SLC6A9P48067 706 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 MLF1P58340 268 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 PPIAP62937 165 aaKnown RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 GRB2P62993 217 aaKnown RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 DBPQ10586 325 aaPredicted RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 PLA2G7Q13093 441 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 TAF13Q15543 124 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 ZNF468Q5VIY5 522 aaPredicted RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 ELP2Q6IA86 826 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 TMEM211Q6ICI0 200 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 LRFN4Q6PJG9 635 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 MARCH3Q86UD3 253 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 RPS19BP1Q86WX3 136 aaKnown RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 KRTAP1-3Q8IUG1 177 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 MDS2Q8NDY4 140 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 TERB2Q8NHR7 220 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 OCSTAMPQ9BR26 566 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 NKX6-2Q9C056 277 aaPredicted RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 CST11Q9H112 138 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 MMP26Q9NRE1 261 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 ZFP57Q9NU63 452 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 FAM206AQ9NX38 181 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 GPR160Q9UJ42 338 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 FBXL2Q9UKC9 423 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 VSIG4Q9Y279 399 aa9.71□□□□□ -0.86
SRP54-205ENST00000554803 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
SRP54-205ENST00000554803 M0QYG6 137 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 ATG12O94817 140 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 APOC3P02656 99 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 CTSSP25774 331 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 ADH6P28332 368 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
SRP54-205ENST00000554803 HMGN3Q15651 99 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 TSC22D1Q15714 1073 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 ETFDHQ16134 617 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 GFOD2Q3B7J2 385 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 SCGB2B2Q4G0G5 96 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 PDSS1Q5T2R2 415 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms