RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MRPL21Q7Z2W9 205 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 DCXRQ7Z4W1 244 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 MOGAT3Q86VF5 341 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SPATA24Q86W54 205 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 NR2C2APQ86WQ0 139 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 LRRC28Q86X40 367 aaPredicted RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 TIGD4Q8IY51 512 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FAM185AQ8N0U4 392 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SPICQ8N5J4 248 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 RFLNBQ8N5W9 214 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 BHLHE23Q8NDY6 225 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 DEFB108BQ8NET1 73 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OR4M2Q8NGB6 313 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OR56B2PQ8NGI1 322 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OR6N2Q8NGY6 317 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OR13G1Q8NGZ3 307 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OR2AE1Q8NHA4 323 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 TEX47Q8TBZ9 253 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SPTSSAQ969W0 71 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SLAMF6Q96DU3 332 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 INTS14Q96SY0 518 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 AMELYQ99218 206 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 FEVQ99581 238 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 COPS4Q9BT78 406 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 C19orf24Q9BVV8 132 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 CADM1Q9BY67 442 aaKnown RBP3.45□□□□□ -1.86
VTI1B-203ENST00000554636 MED20Q9H944 212 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 NTN4Q9HB63 628 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 SLC25A19Q9HC21 320 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 MMP26Q9NRE1 261 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM100Q9NV29 134 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 UBAP1Q9NZ09 502 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 DNAJB9Q9UBS3 223 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 OPN4Q9UHM6 478 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 KLHDC2Q9Y2U9 406 aa3.45□□□□□ -1.86
VTI1B-203ENST00000554636 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 IGHV3-64DA0A0J9YX35 117 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 GGT3PA6NGU5 568 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 SAC3D1A6NKF1 404 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 NPIPB5A8MRT5 1133 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PRR32B1ATL7 298 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 H3BN98 237 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 TRAPPC2LH3BP13 241 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF593O00488 134 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 GYG2O15488 501 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 E2F6O75461 281 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 TIPRLO75663 272 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FSTL3O95633 263 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 WNT2P09544 360 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 SBK2P0C263 348 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ANPEPP15144 967 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ADRA2CP18825 462 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PRKACGP22612 351 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 CA6P23280 308 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FMO3P31513 532 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 MDH2P40926 338 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 OPRL1P41146 370 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 CX3CR1P49238 355 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PRKXP51817 358 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 BLVRAP53004 296 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF121P58317 390 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 GRB2P62993 217 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 LCN2P80188 198 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 CDK5Q00535 292 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF154Q13106 437 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 EIF2B1Q14232 305 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 GINS1Q14691 196 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 MPPED2Q15777 294 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 IZUMO4Q1ZYL8 232 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF404Q494X3 552 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 KLF17Q5JT82 389 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM236Q5W0B7 351 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FAHD2BQ6P2I3 314 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PLBD1Q6P4A8 553 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FAHD1Q6P587 224 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 Q6ZSV7 163 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 C18orf65Q6ZTR6 163 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PGAP1Q75T13 922 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 DPY19L4Q7Z388 723 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 WDR86Q86TI4 376 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ERI1Q8IV48 349 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PARP8Q8N3A8 854 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 BBS1Q8NFJ9 593 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 OR6K6Q8NGW6 343 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 OTOSQ8NHW6 89 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 C2CD4CQ8TF44 421 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 RNF133Q8WVZ7 376 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 SPRYD4Q8WW59 207 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZMYND19Q96E35 227 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FAHD2AQ96GK7 314 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF582Q96NG8 517 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM246Q9BRR3 403 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ADAT1Q9BUB4 502 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ABHD6Q9BV23 337 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FGF23Q9GZV9 251 aaPredicted RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 GABARAPL1Q9H0R8 117 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 OR51V1Q9H2C8 321 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 OPA3Q9H6K4 179 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM165Q9HC07 324 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms