RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 CENPOQ9BU64 300 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 FUNDC2Q9BWH2 189 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 METTL17Q9H7H0 456 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-209ENST00000553949 ITGB1BP2Q9UKP3 347 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 GSTK1Q9Y2Q3 226 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 POLDIP2Q9Y2S7 368 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 TRAV1-2A0A0B4J238 106 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 SHISA3A0PJX4 238 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 SPRY1O43609 319 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 LHBP01229 141 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 EGR1P18146 543 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 MYL9P24844 172 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 GPR6P46095 362 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 POU3F4P49335 361 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 ZP1P60852 638 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 HOXA4Q00056 320 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 FAM201AQ5SY85 155 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 AVPI1Q5T686 147 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 GDPGP1Q6ZNW5 385 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 SLC25A26Q70HW3 274 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 PEG10Q86TG7 708 aaKnown RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 CDH26Q8IXH8 852 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 JAGN1Q8N5M9 183 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 GCSAMQ8N6F7 178 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 BOLLQ8N9W6 283 aaKnown RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 RAB1CQ92928 201 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 TIMD4Q96H15 378 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 GPER1Q99527 375 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 NKX3-1Q99801 234 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-209ENST00000553949 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 NPTNQ9Y639 398 aa10.29□□□□□ -0.76
SHMT2-209ENST00000553949 PPIAL4EA0A075B759 164 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 VWC2LB2RUY7 222 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 SRRM5B3KS81 715 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 PPIAL4DF5H284 164 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 AKR7A2O43488 359 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ANGPTL7O43827 346 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 NOS1APO75052 506 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF205O95201 554 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 CYB5AP00167 134 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ACAA1P09110 424 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-209ENST00000553949 PGA5P0DJD9 388 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 PPIAL4FP0DN26 164 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 TMEM225BP0DP42 221 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 NR4A2P43354 598 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 OR3A4PP47883 348 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 MTNR1BP49286 362 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 GMFBP60983 142 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 BTG1P62324 171 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 GLT8D1Q68CQ7 371 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 LYPD6Q86Y78 171 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ANKRD13BQ86YJ7 626 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 MKXQ8IYA7 352 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 PNLDC1Q8NA58 520 aaKnown RBP10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ZSCAN4Q8NAM6 433 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-209ENST00000553949 POC1AQ8NBT0 407 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 WFDC11Q8NEX6 87 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 OR51F2Q8NH61 342 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 TNFAIP8L1Q8WVP5 186 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 SLAMF9Q96A28 289 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 Q96MF0 132 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF488Q96MN9 340 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 NRIP2Q9BQI9 281 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 UQCC2Q9BRT2 126 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 FAM192AQ9GZU8 254 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 RNF167Q9H6Y7 350 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 CNTD2Q9H8S5 307 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
SHMT2-209ENST00000553949 WIPI2Q9Y4P8 454 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 PPIAL4AQ9Y536 164 aa10.28□□□□□ -0.76
SHMT2-209ENST00000553949 ARID1AO14497 2285 aa10.27□□□□□ -0.76
SHMT2-209ENST00000553949 IGKV1-12A0A0C4DH73 117 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 OOEPA6NGQ2 149 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 F8VVB4 439 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 F8VWA3 439 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-209ENST00000553949 LGALS8O00214 317 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 PDCD5O14737 125 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 WNT9BO14905 357 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 FSTL3O95633 263 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 IGKV1D-12P01611 117 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 IGHV2-70P01814 119 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 CD37P11049 281 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 SLC25A16P16260 332 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 GLRA1P23415 457 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 CD80P33681 288 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 PTGFRP43088 359 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 LSM3P62310 102 aaKnown RBP10.27□□□□□ -0.77
SHMT2-209ENST00000553949 ZMYND11Q15326 602 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 GPR107Q5VW38 600 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 SFRP4Q6FHJ7 346 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-209ENST00000553949 SLC16A12Q6ZSM3 486 aa10.27□□□□□ -0.77
SHMT2-209ENST00000553949 C1QL2Q7Z5L3 287 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms