RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 CAPZA1P52907 286 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TAS2R19P59542 299 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 UBE2MP61081 183 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SCGB2B2Q4G0G5 96 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 APOBEC3DQ96AK3 386 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 CST11Q9H112 138 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 CADP27708 2225 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF736B4DX44 427 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SULT1C2O00338 296 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SFTPBP07988 381 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 PER3P56645 1201 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 CNN3Q15417 329 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 GABRA6Q16445 453 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TAF9Q16594 264 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 PIGYQ3MUY2 71 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 NKAPLQ5M9Q1 402 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 C17orf107Q6ZR85 190 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 Q6ZT83 130 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 C6orf201Q7Z4U5 140 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 HPSE2Q8WWQ2 592 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SNAPC3Q92966 411 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 WNT2BQ93097 391 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SPSB1Q96BD6 273 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 PLSCR3Q9NRY6 295 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TAS2R8Q9NYW2 309 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 KCNN3Q9UGI6 736 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SH3BGRL2Q9UJC5 107 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TLN1Q9Y490 2541 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 PMP2P02689 132 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 SERPINA5P05154 406 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 COX5BP10606 129 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF14P17017 642 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 HRH1P35367 487 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 GNG2P59768 71 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 PRDX4Q13162 271 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 RSU1Q15404 277 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 FAM209BQ5JX69 171 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 TMEM229BQ8NBD8 167 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 DYRK2Q92630 601 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 WBP1Q96G27 269 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF222Q9UK12 451 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 FOXI3A8MTJ6 420 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 MKRN2OSH3BPM6 223 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 MFNGO00587 321 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 MELTFP08582 738 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 RCVRNP35243 200 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 FAUP35544 74 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 ALDH3B1P43353 468 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 NPBWR2P48146 333 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 GPM6AP51674 278 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 SNU13P55769 128 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 IDO2Q6ZQW0 420 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 CCDC54Q8NEL0 328 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 WDR89Q96FK6 387 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 URM1Q9BTM9 101 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 GLRX2Q9NS18 164 aa10.97□□□□□ -0.65
VIPAS39-206ENST00000553888 SSNA1O43805 119 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 CHRM2P08172 466 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 UBBP0CG47 229 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 UBE2NP61088 152 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 OR2T2Q6IF00 324 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 CXorf67Q86X51 503 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 BPIFB2Q8N4F0 458 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 FAM89BQ8N5H3 189 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 OR56B1Q8NGI3 324 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 STARD4Q96DR4 205 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 PECRQ9BY49 303 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF391Q9UJN7 358 aa10.96□□□□□ -0.65
VIPAS39-206ENST00000553888 IGHV3-64DA0A0J9YX35 117 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 AHRRA9YTQ3 701 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 F8VVB4 439 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 F8VWA3 439 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 MSTNO14793 375 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 MALLQ13021 153 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 ARFRP1Q13795 201 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 RBMS2Q15434 407 aaKnown RBP10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 LHFPL2Q6ZUX7 228 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 MRGPRFQ96AM1 343 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 GPR137Q96N19 417 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF69Q9UC07 566 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 SSUH2Q9Y2M2 353 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 SPEF1Q9Y4P9 236 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.66
VIPAS39-206ENST00000553888 PDZK1IP1Q13113 114 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 TBR1Q16650 682 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 PRR30Q53SZ7 412 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 SLC25A26Q70HW3 274 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CISD2Q8N5K1 135 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms