RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TTTY10Q9BZA0 68 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 SIRPDQ9H106 197 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 OR51I2Q9H344 312 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 CNTD2Q9H8S5 307 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 GPR84Q9NQS5 396 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 FBLN5Q9UBX5 448 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 MRM2Q9UI43 246 aaKnown RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 IKZF2Q9UKS7 526 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 TENM3Q9P273 2699 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 A0A1B0GTI1 187 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 A0A1B0GW55 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 ZNF670-ZNF695F2Z2N8 137 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 H0YHG0 523 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DHRS3O75911 302 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 FBP1P09467 338 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L2P0CJ85 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L3P0CJ86 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L4P0CJ87 422 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L5P0CJ88 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L6P0CJ89 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L7P0CJ90 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 RIPPLY1Q0D2K3 151 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 ZNF684Q5T5D7 378 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 TMEM42Q69YG0 159 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4L9Q6RFH8 374 aaPredicted RBP9.68□□□□□ -0.86
SRP54-203ENST00000553544 BTN2A1Q7KYR7 527 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 SSX6Q7RTT6 188 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 ELMOD2Q8IZ81 293 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 FGFRL1Q8N441 504 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 OR5A2Q8NGI9 324 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 SGCDQ92629 289 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DMRTB1Q96MA1 342 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DNTTIP1Q9H147 329 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 WDR13Q9H1Z4 485 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 DCLRE1BQ9H816 532 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 MOB1AQ9H8S9 216 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 NECAP2Q9NVZ3 263 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 SMPD3Q9NY59 655 aaPredicted RBP9.68□□□□□ -0.86
SRP54-203ENST00000553544 DUX4Q9UBX2 424 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 RPUSD1Q9UJJ7 312 aaKnown RBP9.68□□□□□ -0.86
SRP54-203ENST00000553544 GMPPBQ9Y5P6 360 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 R4GMQ9 66 aa9.68□□□□□ -0.86
SRP54-203ENST00000553544 A0A1B0GVI7 797 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 OR5B21A6NL26 309 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ZNF732B4DXR9 585 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 LOC110117498-PIK3R3F6TDL0 507 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 RNASEK-C17orf49H0YIS7 233 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 AKR7A2O43488 359 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 XPNPEP2O43895 674 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 RHBDL1O75783 438 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 OR2T7P0C7T2 308 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 FAHP16930 419 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 EEF1B2P24534 225 aaKnown RBP9.67□□□□□ -0.86
SRP54-203ENST00000553544 GABRA5P31644 462 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 GPM6AP51674 278 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 GNG3P63215 75 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ACTC1P68032 377 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ACTA1P68133 377 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 RCN1Q15293 331 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 CDONQ4KMG0 1287 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 CEP78Q5JTW2 689 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 C11orf88Q6PI97 169 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ZNF788Q6ZQV5 615 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 PLEKHG7Q6ZR37 379 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 KCTD8Q6ZWB6 473 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 SLC36A1Q7Z2H8 476 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 FAM216BQ8N7L0 139 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 OR14K1Q8NGZ2 314 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 OR2T27Q8NH04 317 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ANGPTL6Q8NI99 470 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 HIST1H2AAQ96QV6 131 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 ENPP5Q9UJA9 477 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 OR52A1Q9UKL2 312 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 PIGLQ9Y2B2 252 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 SNX5Q9Y5X3 404 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 KPTNQ9Y664 436 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 V9GYS6 101 aa9.67□□□□□ -0.86
SRP54-203ENST00000553544 A0A1W2PQL4 384 aaPredicted RBP9.66□□□□□ -0.86
SRP54-203ENST00000553544 DHRS7CA6NNS2 312 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 PLXNB1O43157 2135 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 MTRF1O75570 445 aaKnown RBP9.66□□□□□ -0.86
SRP54-203ENST00000553544 CCL1P22362 96 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 SNRPGP62308 76 aaKnown RBP9.66□□□□□ -0.86
SRP54-203ENST00000553544 OXLD1Q5BKU9 147 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 DMRTC1Q5HYR2 192 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 SLC25A30Q5SVS4 291 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 MOB3CQ70IA8 216 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 FAM220AQ7Z4H9 259 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 THAP5Q7Z6K1 395 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 SETD9Q8NE22 299 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 OR5T2Q8NGG2 359 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 OR5R1Q8NH85 324 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 ST8SIA4Q92187 359 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 AQP3Q92482 292 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 PPA2Q9H2U2 334 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms