RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 GLCEO94923 617 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ALPLP05186 524 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 H2BFMP0C1H6 154 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SPI1P17947 270 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 IGFBP5P24593 272 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 COL8A2P25067 703 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 GGT2P36268 569 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 MPV17P39210 176 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 WNT5AP41221 380 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 NAA10P41227 235 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 THBS3P49746 956 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF133P52736 654 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ACTR3P61158 418 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 CDK5Q00535 292 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 CTF1Q16619 201 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 LRRC36Q1X8D7 754 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 IGSF11Q5DX21 431 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZFP1Q6P2D0 407 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZBTB49Q6ZSB9 765 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 DPY19L4Q7Z388 723 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 KRT77Q7Z794 578 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF101Q8IZC7 436 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 CIARTQ8N365 385 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 BHLHE23Q8NDY6 225 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 NUP37Q8NFH4 326 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 BBS1Q8NFJ9 593 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SLC26A10Q8NG04 563 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 OR2Z1Q8NG97 314 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 KLF14Q8TD94 323 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SPRYD4Q8WW59 207 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 GTF3AQ92664 365 aaKnown RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 PTP4A1Q93096 173 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SLAMF6Q96DU3 332 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 C18orf12Q96KH6 178 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF75AQ96N20 296 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 INTS14Q96SY0 518 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 MYCBPQ99417 103 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ATF6BQ99941 703 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 COPS4Q9BT78 406 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 HCAR1Q9BXC0 346 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 REG4Q9BYZ8 158 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 TTTY10Q9BZA0 68 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 PRRG3Q9BZD7 231 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF442Q9H7R0 627 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 S100A14Q9HCY8 104 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 YAE1D1Q9NRH1 226 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF701Q9NV72 531 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 MRPL22Q9NWU5 206 aaKnown RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 IMPAD1Q9NX62 359 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SLCO1C1Q9NYB5 712 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 MYEF2Q9P2K5 600 aaKnown RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 LAMP5Q9UJQ1 280 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 LHFPL6Q9Y693 200 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 FBN2P35556 2912 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 KIAA2026Q5HYC2 2103 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV4-30-2A0A087WSY4 118 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ISPDA4D126 451 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ARRDC5A6NEK1 342 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SURF4O15260 269 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 PRKYO43930 277 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 LY6G6DO95868 133 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SBK2P0C263 348 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SLC2A1P11166 492 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 POLR2IP36954 125 aaKnown RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 MAGEB1P43366 347 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 BLVRAP53004 296 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SLC25A1P53007 311 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 RAD23AP54725 363 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 DSCR9P59020 149 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 BRWD1-AS2P59051 145 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ESRRGP62508 458 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 TNFAIP6P98066 277 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ECH1Q13011 328 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 PSG7Q13046 419 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SNCBQ16143 134 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 LCN1P1Q5VSP4 162 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 OR2T2Q6IF00 324 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 C11orf71Q6IPW1 123 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 FAHD1Q6P587 224 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 PRSS57Q6UWY2 283 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 FOXL2NBQ6ZUU3 175 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 RFPL4BQ6ZWI9 263 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 MRPL21Q7Z2W9 205 aaKnown RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CCDC190Q86UF4 302 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 COMMD2Q86X83 199 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CBR4Q8N4T8 237 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF555Q8NEP9 628 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CCL17Q92583 94 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 APOBEC3DQ96AK3 386 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 TBX5Q99593 518 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 TEAD3Q99594 435 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 RBM4BQ9BQ04 359 aaKnown RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 C9orf16Q9BUW7 83 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms